Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 0.0e+00 1355.9 710 100.0
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 4.9e-312 1074.3 711 78.5
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.2e-228 797.0 700 62.0
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 5.4e-221 771.5 710 59.4
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 9.6e-218 760.8 708 61.6
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 9.3e-213 744.2 719 58.3
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.2e-212 743.8 713 59.5
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 9.6e-210 734.2 713 61.0
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 1.2e-207 727.2 713 58.8
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 2.7e-204 716.1 717 59.3
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 2.7e-204 716.1 711 56.4
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 6.7e-203 711.4 707 57.1
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 9.6e-202 707.6 702 56.6
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.1e-200 704.1 716 58.7
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 5.9e-199 698.4 714 57.1
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.6e-199 698.0 711 57.1
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 6.5e-198 694.9 713 58.3
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.0e-195 687.6 714 55.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.0e-195 687.6 703 57.9
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 3.9e-195 685.6 719 56.6
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 5.1e-195 685.3 722 54.2
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.9e-194 683.3 719 55.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.4e-192 677.2 714 56.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 2.4e-192 676.4 716 55.3
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 6.9e-192 674.9 719 56.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.0e-190 671.0 699 56.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.4e-189 667.2 709 54.6
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 3.2e-189 666.0 722 54.3
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.5e-189 665.2 709 54.2
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.2e-188 664.1 708 55.9
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.7e-188 662.9 715 58.2
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.3e-187 659.8 714 58.1
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 8.8e-187 657.9 641 58.5
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 8.2e-185 651.4 719 52.9
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.4e-184 650.6 736 53.8
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-184 650.2 713 53.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 9.1e-184 647.9 713 53.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 3.4e-183 646.0 766 51.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.4e-183 646.0 724 55.0
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 7.7e-183 644.8 715 52.7
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.2e-182 643.3 700 53.9
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.2e-181 639.4 720 53.8
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.2e-180 637.5 700 53.6
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 6.1e-180 635.2 724 53.2
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.4e-179 634.0 719 52.9
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.6e-175 619.8 713 55.8
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-174 617.8 710 55.9
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.2e-174 616.7 711 54.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 2.9e-174 616.3 721 51.6
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.8e-174 615.9 638 58.8
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 5.5e-173 612.1 828 48.8
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.4e-173 611.3 718 55.3
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.1e-172 610.1 621 58.0
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-170 604.0 714 55.0
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 2.0e-170 603.6 734 49.3
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.4e-168 597.4 732 49.0
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 4.2e-165 585.9 714 50.3
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.3e-163 580.1 720 53.8
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 3.4e-162 576.2 721 50.6
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 7.5e-162 575.1 737 48.3
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.3e-158 563.5 733 48.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 7.2e-157 558.5 715 49.2
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-155 553.9 717 48.7
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.3e-153 547.7 718 48.9
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.3e-153 547.7 724 49.7
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-153 547.4 568 59.5
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.8e-152 543.9 715 46.6
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.2e-151 541.2 735 49.3
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.0e-151 540.4 717 48.5
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.0e-151 540.4 640 51.7
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.7e-150 537.3 737 45.9
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 3.8e-150 536.2 782 46.3
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 9.5e-149 531.6 818 42.9
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-148 531.2 713 46.6
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.2e-148 531.2 711 46.7
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.6e-148 530.8 723 48.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.1e-148 530.4 750 46.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.6e-146 523.5 720 49.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.6e-146 523.5 781 44.2
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.9e-145 519.2 711 45.9
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.2e-143 514.6 523 58.1
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.0e-142 510.0 716 46.2
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.1e-139 501.5 715 47.1
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.4e-139 501.1 713 46.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 8.9e-139 498.4 715 46.9
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.5e-138 497.7 716 45.4
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.7e-137 494.2 739 44.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.4e-136 490.3 712 47.1
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 3.2e-136 490.0 618 48.4
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 9.2e-136 488.4 715 44.6
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 6.2e-132 475.7 710 44.8
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 1.4e-131 474.6 736 43.5
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.2e-130 471.5 781 42.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.7e-129 467.6 717 44.4
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.2e-129 467.2 723 43.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.9e-129 466.8 721 45.4
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.3e-126 457.2 723 45.0
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.9e-126 456.4 715 43.8
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.5e-125 453.8 718 41.6
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.4e-123 448.0 739 43.3
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.0e-123 446.4 668 44.5
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 5.8e-122 442.6 805 40.2
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 6.4e-121 439.1 714 42.4
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.4e-120 438.0 763 40.0
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.9e-120 437.6 686 44.2
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.5e-117 427.2 730 44.0
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 7.6e-114 415.6 650 44.5
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 4.9e-113 412.9 700 41.0
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 8.4e-113 412.1 797 37.6
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 2.4e-112 410.6 728 40.7
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.2e-111 408.3 653 43.6
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.0e-110 405.2 695 42.3
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 2.3e-110 404.1 703 42.2
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.6e-108 397.9 642 41.9
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 2.1e-108 397.5 702 43.0
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 4.0e-107 393.3 696 42.5
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.4e-106 390.2 285 69.1
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.5e-106 389.8 719 39.8
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 4.5e-106 389.8 692 42.5
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 9.9e-106 388.7 702 42.6
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.1e-104 385.2 700 41.7
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.9e-104 384.4 638 41.2
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 3.2e-104 383.6 692 41.3
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 9.3e-104 382.1 693 41.1
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 2.1e-103 380.9 694 41.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 2.1e-103 380.9 695 41.9
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 4.6e-103 379.8 541 45.3
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.1e-101 375.2 723 39.1
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.9e-101 374.4 695 41.2
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 4.3e-101 373.2 693 41.1
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.4e-101 372.5 714 37.1
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 5.8e-98 362.8 694 40.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.9e-98 362.1 593 43.0
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 3.2e-96 357.1 699 40.3
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.1e-95 354.4 693 39.7
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.1e-91 340.5 715 36.4
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.6e-90 337.4 340 60.0
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.4e-88 331.6 870 32.6
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.1e-87 327.8 285 61.1
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 8.2e-84 315.8 546 39.7
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.1e-83 315.5 351 54.4
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.3e-81 308.5 386 50.3
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 4.6e-79 300.1 584 38.9
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 8.8e-78 295.8 731 35.8
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 4.8e-76 290.0 593 36.3
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.6e-74 284.3 358 48.3
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 3.2e-72 277.3 616 36.4
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 9.4e-72 275.8 244 60.2
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.7e-71 274.2 302 51.0
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.3e-68 265.4 502 40.0
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 9.1e-67 259.2 641 33.5
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.4e-62 245.4 446 40.8
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 2.3e-62 244.6 696 29.5
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 6.7e-62 243.0 327 44.0
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 5.3e-51 206.8 139 74.1
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.1e-47 193.4 142 71.1
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.4e-43 182.2 734 31.6
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.0e-43 179.9 178 60.7
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.3e-41 174.9 461 36.4
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.9e-41 174.5 499 31.9
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.6e-39 168.7 391 35.3
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 3.4e-37 161.0 131 63.4
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.9e-34 150.2 255 39.6
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 6.8e-30 136.7 371 30.2
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 4.4e-29 134.0 98 71.4
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.7e-28 132.1 207 42.5
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 2.9e-28 131.3 144 57.6
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.2e-26 125.9 462 30.7
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-20 105.9 109 51.4
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.3e-16 91.3 67 71.6
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.6e-15 87.8 67 58.2
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.0e-13 82.0 55 74.5
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 5.8e-13 80.5 281 31.7
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.2e-11 73.2 93 49.5
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 3.5e-10 71.2 189 36.5
SHI13766 Sapria himalayana HOM05D003626 ORTHO05D004255 8.6e-09 66.6 210 30.0
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.1e-08 66.2 66 51.5
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.5e-08 65.9 158 34.8
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.5e-08 65.1 114 37.7
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.5e-08 65.1 116 37.1
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.8e-06 57.0 56 62.5


User provided reference genes

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