Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.3e-110 401.7 207 100.0
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.0e-74 281.6 206 71.8
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 1.9e-73 279.6 210 68.6
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.5e-73 279.3 206 68.4
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 2.3e-71 272.7 206 69.4
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 6.7e-71 271.2 207 67.6
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 8.8e-71 270.8 194 72.2
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.1e-70 270.4 189 73.0
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.5e-70 270.0 204 69.6
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 3.3e-70 268.9 209 67.5
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.3e-69 266.9 211 65.9
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.3e-69 266.9 211 67.3
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.8e-69 265.8 210 69.5
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.8e-69 265.8 212 65.6
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.8e-69 265.8 207 69.1
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 3.7e-69 265.4 219 64.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 3.7e-69 265.4 211 66.4
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 3.7e-69 265.4 186 71.5
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 3.7e-69 265.4 199 69.8
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 4.8e-69 265.0 206 69.9
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 8.2e-69 264.2 205 67.3
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.4e-68 263.5 213 65.3
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 1.8e-68 263.1 200 69.0
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.4e-68 262.7 179 74.9
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 7.0e-68 261.2 192 70.3
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 7.0e-68 261.2 189 72.0
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 9.1e-68 260.8 211 65.4
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 9.1e-68 260.8 211 65.9
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.2e-67 260.4 211 65.4
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.2e-67 260.4 212 66.0
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 1.6e-67 260.0 191 67.0
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.0e-67 259.6 185 69.7
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 2.6e-67 259.2 185 70.3
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.6e-67 259.2 186 69.4
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 3.5e-67 258.8 188 68.6
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 4.5e-67 258.5 211 64.5
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.7e-67 257.7 202 65.3
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.0e-66 257.3 188 68.1
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.3e-66 256.9 211 65.4
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 2.2e-66 256.1 209 64.6
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-66 255.8 202 65.3
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.8e-66 255.4 202 65.3
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 5.0e-66 255.0 214 64.5
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.5e-66 254.6 202 64.9
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.1e-65 253.8 222 61.3
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.9e-65 253.1 202 64.4
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 1.9e-65 253.1 185 67.6
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 2.5e-65 252.7 197 65.0
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 3.2e-65 252.3 211 64.9
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 3.2e-65 252.3 185 69.2
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 3.2e-65 252.3 216 62.0
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 4.2e-65 251.9 209 63.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 5.5e-65 251.5 185 67.0
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.5e-65 251.5 185 68.1
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 7.2e-65 251.1 216 59.7
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 3.6e-64 248.8 186 67.7
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 4.7e-64 248.4 210 62.4
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.0e-63 245.7 168 72.6
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.5e-62 243.4 209 61.7
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.5e-62 243.4 161 75.8
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.5e-62 243.4 171 70.2
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 4.4e-62 241.9 187 65.2
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 9.7e-62 240.7 207 61.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.7e-61 240.0 176 64.2
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.2e-61 239.6 176 64.8
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 3.7e-61 238.8 204 58.8
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.1e-60 237.3 169 69.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 1.4e-60 236.9 206 61.2
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 1.8e-60 236.5 203 61.1
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.8e-60 236.5 210 59.5
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 3.1e-60 235.7 210 59.5
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.6e-59 233.4 176 65.9
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 2.0e-59 233.0 186 63.4
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 2.0e-59 233.0 191 67.0
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 2.7e-59 232.6 168 69.6
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 5.9e-59 231.5 207 59.9
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 2.2e-58 229.6 170 67.6
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-58 229.2 202 60.9
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 5.0e-58 228.4 211 60.7
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.1e-57 227.3 165 69.7
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.5e-57 226.1 168 66.1
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 5.5e-57 224.9 180 60.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 5.5e-57 224.9 159 71.7
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.6e-56 223.4 165 68.5
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.0e-55 219.2 168 64.3
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 4.0e-55 218.8 205 56.6
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 8.8e-55 217.6 170 64.7
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.2e-54 217.2 202 58.9
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.2e-54 217.2 202 58.9
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.0e-54 216.5 205 56.6
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.4e-54 215.3 166 61.4
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 5.7e-54 214.9 201 56.7
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 5.7e-54 214.9 205 54.6
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 9.8e-54 214.2 147 72.8
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 9.8e-54 214.2 147 72.8
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.3e-53 213.8 197 57.9
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 1.7e-53 213.4 207 55.1
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 1.7e-53 213.4 207 55.1
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 1.7e-53 213.4 207 55.1
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.7e-53 213.4 147 72.1
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 2.2e-53 213.0 173 60.1
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 2.2e-53 213.0 173 60.1
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.8e-53 212.6 167 61.7
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 3.7e-53 212.2 164 62.8
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 5.4e-52 208.4 146 72.6
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 5.4e-52 208.4 147 70.1
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 2.3e-50 203.0 200 54.5
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 2.3e-50 203.0 147 70.1
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 1.1e-49 200.7 147 69.4
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.9e-49 199.9 169 61.5
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.3e-49 199.1 200 56.0
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 5.5e-49 198.4 147 66.7
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 5.5e-49 198.4 147 66.7
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 9.5e-49 197.6 158 60.1
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 3.6e-48 195.7 146 67.1
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 3.6e-48 195.7 147 63.9
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 8.0e-48 194.5 147 65.3
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.0e-47 194.1 127 78.0
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.8e-47 193.4 145 62.8
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 3.0e-47 192.6 178 53.9
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 5.2e-47 191.8 147 66.7
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 3.4e-46 189.1 174 59.8
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 6.3e-45 184.9 147 61.9
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 1.4e-44 183.7 179 55.3
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 4.1e-44 182.2 145 61.4
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.3e-42 177.2 125 73.6
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.7e-42 176.8 127 67.7
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 5.0e-42 175.3 172 59.9
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 5.0e-42 175.3 172 59.9
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 5.0e-42 175.3 137 64.2
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 3.3e-41 172.6 160 55.6
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.3e-41 172.2 133 70.7
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.6e-40 169.1 108 80.6
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 8.9e-39 164.5 205 44.9
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 2.6e-38 162.9 171 48.0
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 2.2e-37 159.8 179 47.5
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 2.4e-36 156.4 187 46.0
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.8e-35 151.4 105 74.3
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.3e-34 149.8 105 73.3
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 3.9e-34 149.1 108 72.2
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 5.6e-33 145.2 127 56.7
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 3.6e-32 142.5 213 43.2
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 1.8e-31 140.2 212 42.9
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.2e-30 137.5 194 43.3
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.1e-27 126.7 150 44.7
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 4.0e-23 112.5 87 59.8
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.4e-15 87.4 172 34.3
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 8.4e-13 78.2 195 29.2
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.8e-11 71.6 60 51.7
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.3e-10 70.9 76 46.1
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.9e-10 69.3 58 51.7


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