Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 4.9e-61 237.7 124 100.0
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 1.0e-34 150.2 139 61.9
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 9.8e-17 90.5 172 37.2
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 1.7e-16 89.7 139 40.3
Potri.018G137700 Populus trichocarpa HOM05D009958 ORTHO05D007393 3.7e-16 88.6 151 42.4
Potri.T045901 Populus trichocarpa HOM05D009958 ORTHO05D007393 4.8e-16 88.2 151 42.4
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 6.3e-16 87.8 164 43.3
Ciclev10026723m.g Citrus clementina HOM05D009958 ORTHO05D007393 8.3e-16 87.4 145 42.8
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.4e-15 85.9 165 37.6
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 7.7e-14 80.9 159 35.8
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 2.2e-13 79.3 165 40.0
Gohir.A11G058500 Gossypium hirsutum HOM05D009958 ORTHO05D007393 2.9e-13 79.0 146 41.8
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 6.5e-13 77.8 174 33.3
Gorai.007G067700 Gossypium raimondii HOM05D009958 ORTHO05D007393 1.9e-12 76.3 145 40.7
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 2.5e-12 75.9 156 37.2
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 2.5e-12 75.9 156 37.2
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 5.5e-12 74.7 166 36.1
Sabra19G0000200 Salix brachista HOM05D009958 ORTHO05D007393 5.5e-12 74.7 166 38.6
Gohir.D11G062800 Gossypium hirsutum HOM05D009958 ORTHO05D007393 4.7e-11 71.6 142 38.7
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 8.0e-11 70.9 172 35.5
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 8.8e-10 67.4 172 30.8
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 1.5e-09 66.6 149 32.9
Aqoxy2G00980 Aquilegia oxysepala HOM05D009958 ORTHO05D007393 9.8e-09 63.9 122 39.3
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.2e-08 62.8 131 35.9
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 2.2e-08 62.8 153 35.3
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.8e-08 62.4 165 35.2
TWI79G1017 Tripterygium wilfordii HOM05D009958 ORTHO05D007393 6.3e-08 61.2 162 32.7
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 1.4e-07 60.1 133 35.3
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 2.4e-07 59.3 145 35.2
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 2.4e-07 59.3 143 35.0
Atru.chr3.1470 Acer truncatum HOM05D009958 ORTHO05D007393 4.1e-07 58.5 152 33.6
DCAR_013184 Daucus carota HOM05D009958 ORTHO05D007393 4.1e-07 58.5 139 34.5
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 7.0e-07 57.8 162 35.2
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 2.0e-06 56.2 159 30.8
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 2.7e-06 55.8 136 34.6
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 2.7e-06 55.8 153 32.7
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 2.7e-06 55.8 162 30.9
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 4.5e-06 55.1 83 47.0
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 4.5e-06 55.1 89 40.4
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 4.5e-06 55.1 149 32.2
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 5.9e-06 54.7 87 41.4


User provided reference genes

Program Settings