Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 1.6e-242 842.4 448 100.0
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.7e-191 672.9 441 80.7
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 5.4e-150 535.0 447 69.1
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.5e-149 532.3 447 68.7
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 6.0e-149 531.6 447 68.7
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 8.9e-145 517.7 449 68.4
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 3.4e-144 515.8 449 68.2
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.9e-127 458.8 466 60.3
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 9.3e-126 454.5 470 63.0
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 7.9e-125 451.4 467 59.7
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 3.0e-124 449.5 474 59.5
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.6e-122 443.7 460 58.5
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 6.2e-122 441.8 470 61.7
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 1.3e-119 434.1 465 58.9
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 2.2e-119 433.3 470 59.6
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 2.5e-118 429.9 472 58.1
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 4.3e-115 419.1 467 58.0
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 6.2e-114 415.2 467 56.7
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.4e-113 414.1 470 57.7
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.4e-113 414.1 467 57.2
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 9.0e-113 411.4 470 56.6
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.6e-106 390.6 471 55.4
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 6.3e-106 388.7 490 53.7
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.4e-105 387.5 471 54.6
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 4.5e-104 382.5 474 54.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 5.9e-104 382.1 479 54.9
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 6.5e-103 378.6 476 53.8
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 9.4e-102 374.8 466 53.0
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 7.9e-101 371.7 466 54.5
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.3e-98 364.4 475 53.1
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 6.3e-98 362.1 470 51.3
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.1e-97 359.8 467 53.7
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 3.1e-97 359.8 486 50.2
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 6.9e-97 358.6 467 53.7
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 3.4e-96 356.3 462 53.2
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.7e-95 354.0 480 50.4
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 2.2e-95 353.6 501 48.5
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 8.5e-95 351.7 490 48.8
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.1e-94 351.3 495 49.7
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.9e-94 350.5 486 49.4
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 7.2e-94 348.6 486 49.4
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 1.6e-93 347.4 467 52.5
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 4.7e-93 345.9 487 48.9
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.0e-92 344.7 467 52.2
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.0e-92 344.7 478 50.8
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 3.0e-92 343.2 489 49.1
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 5.7e-91 339.0 474 48.1
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 8.5e-87 325.1 490 46.5
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 8.0e-85 318.5 488 48.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-84 317.4 459 48.6
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.0e-84 316.6 488 46.7
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 9.7e-83 311.6 496 46.8
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 9.1e-81 305.1 458 46.3
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.2e-80 304.7 426 48.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.6e-80 304.3 474 45.4
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 3.5e-80 303.1 468 47.2
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 2.9e-79 300.1 498 45.4
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 7.2e-78 295.4 316 61.4
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 1.0e-76 291.6 523 43.4
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.0e-76 289.7 433 49.0
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 8.8e-76 288.5 494 44.7
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.2e-75 288.1 494 45.1
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.0e-75 287.3 450 47.1
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.0e-75 287.3 473 44.0
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 3.7e-74 283.1 498 45.2
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 4.8e-74 282.7 470 44.3
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 8.3e-74 282.0 469 46.7
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 7.0e-73 278.9 467 45.0
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.2e-72 278.1 454 44.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.0e-72 277.3 479 44.1
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 1.7e-71 274.2 437 46.9
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.6e-69 267.7 452 44.0
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 2.1e-69 267.3 455 44.2
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.0e-68 265.0 449 45.4
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.4e-67 260.0 446 44.4
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.7e-66 257.7 336 52.4
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 8.3e-66 255.4 440 43.0
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 5.4e-65 252.7 475 41.5
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.9e-63 246.9 449 44.1
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.9e-63 246.9 481 40.1
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 5.0e-63 246.1 488 41.2
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 8.9e-60 235.3 463 41.0
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.0e-59 234.2 465 41.3
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.3e-58 231.5 447 42.1
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 1.7e-58 231.1 447 42.1
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 7.0e-57 225.7 449 41.6
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.7e-56 223.8 526 37.8
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 5.0e-55 219.5 464 38.6
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.1e-54 218.4 456 38.4
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 2.8e-53 213.8 473 39.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 2.8e-53 213.8 460 39.3
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 2.3e-52 210.7 504 37.1
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 4.0e-52 209.9 504 36.7
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 2.2e-50 204.1 483 36.2
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 4.6e-48 196.4 438 38.6
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 5.0e-47 193.0 446 38.1
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 5.6e-46 189.5 440 37.0
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 5.6e-46 189.5 379 40.1
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.2e-45 188.3 478 38.3
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 8.9e-44 182.2 444 37.6
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.4e-41 174.9 441 36.3
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 9.5e-38 162.2 471 34.8
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 2.3e-36 157.5 440 33.6
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 9.9e-35 152.1 469 34.8
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 7.1e-33 146.0 481 33.1
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.7e-31 141.4 522 32.6
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 4.0e-28 130.2 449 33.6
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 3.2e-25 120.6 503 29.4
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.7e-23 114.8 162 49.4
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 2.3e-23 114.4 175 48.0
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 1.3e-21 108.6 168 48.8
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.5e-19 101.7 179 43.0
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 8.4e-18 95.9 176 39.2
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.1e-17 95.5 392 30.6
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 9.6e-14 82.4 69 59.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 8.1e-13 79.3 154 40.9
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.4e-12 78.6 154 38.3
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 6.9e-12 76.3 413 29.1
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 2.0e-11 74.7 154 39.6
Lsat_1_v5_gn_5_187260 Lactuca sativa HOM05D006426 ORTHO05D007737 1.1e-06 58.9 140 35.7


User provided reference genes

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