Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 2.0e-192 675.6 346 100.0
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 5.0e-135 485.0 354 72.9
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 2.7e-125 452.6 354 69.8
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.6e-125 452.2 344 69.5
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.8e-122 442.6 353 66.6
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 3.1e-121 439.1 353 65.7
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 5.9e-120 434.9 355 65.4
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.4e-118 430.3 361 64.8
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.2e-118 429.1 356 68.0
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 6.1e-117 424.9 352 62.8
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 2.6e-115 419.5 354 63.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 3.3e-115 419.1 344 66.3
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 3.3e-115 419.1 363 60.9
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 2.8e-114 416.0 357 64.1
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 4.8e-114 415.2 351 63.8
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 4.8e-114 415.2 351 64.4
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.4e-113 413.7 354 63.3
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.8e-113 413.3 337 66.8
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.4e-113 412.9 339 66.1
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 3.1e-113 412.5 354 64.1
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 7.0e-113 411.4 294 71.8
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 2.0e-112 409.8 343 63.3
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 7.7e-112 407.9 362 61.3
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.2e-110 402.5 296 69.3
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 4.2e-110 402.1 362 60.8
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 5.5e-110 401.7 342 62.6
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 3.6e-109 399.1 331 64.7
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.6e-109 399.1 275 71.6
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 3.0e-108 396.0 256 74.6
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 5.7e-107 391.7 351 60.1
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 7.5e-107 391.3 352 60.2
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.8e-106 389.4 351 59.8
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.3e-106 388.3 352 59.7
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.3e-105 385.2 354 59.9
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 2.7e-104 382.9 344 61.6
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 4.5e-104 382.1 273 70.0
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.5e-104 382.1 256 74.6
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 5.9e-104 381.7 270 69.6
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 2.2e-103 379.8 273 69.6
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 6.5e-103 378.3 344 61.6
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.1e-102 377.5 270 68.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.9e-102 376.7 270 68.9
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 3.2e-102 375.9 270 67.8
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.2e-101 374.0 359 56.8
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.7e-101 372.9 273 68.5
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 3.6e-101 372.5 359 56.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 6.1e-101 371.7 273 68.5
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 6.1e-101 371.7 358 57.0
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 8.0e-101 371.3 269 68.4
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.0e-100 370.9 356 57.0
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.8e-100 370.2 274 67.2
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.3e-100 369.8 349 60.7
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.2e-100 368.6 268 67.9
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 5.2e-100 368.6 273 68.1
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 5.2e-100 368.6 351 57.5
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 1.2e-99 367.5 289 64.7
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.2e-99 367.5 325 59.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 5.7e-99 365.2 323 58.5
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.7e-98 363.6 376 54.8
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.4e-97 360.5 256 68.4
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 4.1e-97 359.0 357 52.9
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 5.4e-97 358.6 272 66.5
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 5.4e-97 358.6 354 58.2
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 2.0e-96 356.7 309 58.6
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 4.5e-96 355.5 353 56.1
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.9e-96 355.1 364 53.3
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.0e-95 354.4 349 59.3
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 6.6e-95 351.7 280 63.6
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 6.6e-95 351.7 347 54.5
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 8.6e-95 351.3 292 62.3
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.1e-94 350.9 340 55.3
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.9e-94 350.1 321 58.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 5.5e-94 348.6 356 53.9
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 7.2e-94 348.2 342 55.6
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.7e-93 345.5 346 54.6
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.0e-92 344.4 322 57.1
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.5e-91 340.5 268 61.9
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.5e-91 340.5 342 53.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.6e-91 339.7 312 56.7
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 3.4e-91 339.3 349 53.0
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 9.8e-91 337.8 273 64.8
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 9.8e-91 337.8 328 54.3
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.3e-90 337.4 258 64.7
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 1.7e-90 337.0 267 63.3
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.7e-90 337.0 333 53.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 3.7e-90 335.9 390 50.3
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.9e-90 335.5 339 52.8
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.1e-89 334.3 269 62.5
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.8e-89 333.6 361 51.2
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 3.1e-89 332.8 364 53.3
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 3.1e-89 332.8 315 54.6
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 4.1e-89 332.4 319 55.5
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.5e-88 329.3 298 56.7
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.0e-87 327.8 288 56.6
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 7.3e-86 321.6 365 50.1
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.6e-85 320.5 357 49.0
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.0e-84 316.2 353 51.8
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 6.4e-82 308.5 258 60.9
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 8.3e-82 308.1 326 50.6
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.3e-79 300.8 235 65.1
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.2e-77 294.3 232 63.8
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 9.8e-75 284.6 304 53.9
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 5.4e-73 278.9 206 65.5
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 5.8e-59 232.3 231 52.8
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 5.3e-52 209.1 214 52.8
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.0e-47 194.9 162 61.7
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.8e-39 167.5 136 61.0
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.0e-26 125.2 283 33.9
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 3.1e-20 103.6 288 29.5
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 3.1e-20 103.6 76 69.7
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.4e-17 94.7 200 36.0
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 2.9e-10 70.5 61 60.7
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.4e-09 68.2 93 48.4
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.5e-09 67.4 105 37.1
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 4.2e-09 66.6 311 25.7
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 7.2e-09 65.9 58 55.2


User provided reference genes

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