Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 1.2e-71 273.1 135 100.0
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.8e-17 92.4 135 45.9
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 1.1e-16 90.5 117 51.3
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 2.0e-15 86.3 130 45.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 5.8e-15 84.7 130 45.4
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 4.9e-14 81.6 130 44.6
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 8.4e-14 80.9 148 40.5
Potri.013G144200 Populus trichocarpa HOM05D006722 ORTHO05D007944 8.4e-14 80.9 121 44.6
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 1.1e-13 80.5 144 45.8
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.9e-13 79.7 140 47.9
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 4.2e-13 78.6 123 44.7
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 7.1e-13 77.8 126 43.7
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 7.1e-13 77.8 126 43.7
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 2.7e-12 75.9 129 42.6
Sabra13G0116200 Salix brachista HOM05D006722 ORTHO05D007944 2.7e-12 75.9 110 46.4
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 6.0e-12 74.7 133 44.4
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 7.9e-12 74.3 128 43.0
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.0e-11 73.9 131 42.0
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 3.0e-11 72.4 150 36.7
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 6.7e-11 71.2 152 41.4
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 6.7e-11 71.2 129 38.8
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 6.7e-11 71.2 170 36.5
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 8.7e-11 70.9 117 43.6
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 2.5e-10 69.3 145 39.3
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 2.5e-10 69.3 128 39.1
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 4.3e-10 68.6 145 38.6
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 5.6e-10 68.2 162 35.2
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 5.6e-10 68.2 147 38.8
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 2.1e-09 66.2 156 41.0
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 2.1e-09 66.2 148 40.5
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 4.8e-09 65.1 153 38.6
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 8.2e-09 64.3 146 40.4
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.1e-08 63.9 151 38.4
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 4.0e-08 62.0 142 37.3
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 5.3e-08 61.6 103 42.7
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 6.9e-08 61.2 151 35.8
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.5e-07 60.1 136 37.5
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 1.5e-07 60.1 152 36.2
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 2.6e-07 59.3 103 39.8
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.4e-07 58.9 132 36.4
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 3.4e-07 58.9 136 35.3
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 4.5e-07 58.5 123 39.8
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.0e-06 57.4 146 36.3
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.0e-06 57.4 83 45.8
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 1.0e-06 57.4 115 38.3
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.0e-06 57.4 136 35.3
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 1.3e-06 57.0 146 34.9
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.3e-06 57.0 136 35.3
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.3e-06 57.0 151 35.1
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 1.3e-06 57.0 185 34.1
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 1.7e-06 56.6 145 35.9
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.7e-06 56.6 126 38.1
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.7e-06 56.6 126 38.1
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 1.7e-06 56.6 126 38.1
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 1.7e-06 56.6 132 36.4
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 1.7e-06 56.6 143 33.6
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 2.2e-06 56.2 145 36.6
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 2.2e-06 56.2 149 35.6
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 2.2e-06 56.2 130 36.2
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 2.9e-06 55.8 119 38.7
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.9e-06 55.8 145 35.9
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 3.8e-06 55.5 136 36.0
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 6.5e-06 54.7 130 36.9
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 6.5e-06 54.7 198 27.3
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 6.5e-06 54.7 141 32.6
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 8.4e-06 54.3 94 44.7


User provided reference genes

Program Settings