Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G145813 Manihot esculenta HOM05D006085 ORTHO05D007559 7.7e-140 500.4 235 100.0
Manes.13G145816 Manihot esculenta HOM05D006085 ORTHO05D007559 3.2e-117 425.2 201 99.5
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 6.6e-115 417.5 201 96.0
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 2.4e-104 382.5 201 91.0
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 6.9e-96 354.4 201 79.1
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 6.9e-96 354.4 201 80.1
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 9.0e-96 354.0 201 78.6
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 1.5e-95 353.2 201 81.1
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 4.4e-95 351.7 201 77.6
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 2.4e-93 345.9 201 77.6
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 7.1e-93 344.4 201 78.6
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 2.1e-92 342.8 212 73.1
Ca_18934_v3 Cicer arietinum L. HOM05D006085 ORTHO05D007559 2.7e-92 342.4 201 75.6
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 4.6e-92 341.7 201 78.1
Manes.13G145812 Manihot esculenta HOM05D006085 ORTHO05D007559 6.0e-92 341.3 166 95.2
Sed0017729 Sechium edule HOM05D006085 ORTHO05D007559 1.0e-91 340.5 200 73.5
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 1.3e-91 340.1 212 74.1
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 1.7e-91 339.7 201 77.6
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 2.3e-91 339.3 201 76.6
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 2.3e-91 339.3 201 75.6
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 5.1e-91 338.2 201 76.1
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 5.1e-91 338.2 203 74.9
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 1.9e-90 336.3 201 72.6
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 1.9e-90 336.3 201 74.6
Lj8C109T7 Lonicera japonica HOM05D006085 ORTHO05D007559 5.6e-90 334.7 201 75.6
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 9.6e-90 334.0 201 73.6
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 1.3e-89 333.6 201 75.1
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 1.3e-89 333.6 201 75.1
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 3.6e-89 332.0 201 71.1
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 3.6e-89 332.0 201 74.1
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 4.8e-89 331.6 201 71.6
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 1.1e-88 330.5 227 67.8
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 1.1e-88 330.5 212 71.7
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 1.1e-88 330.5 201 75.1
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 1.8e-88 329.7 201 74.1
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 2.4e-88 329.3 201 74.1
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 3.1e-88 328.9 201 73.1
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 3.1e-88 328.9 201 73.6
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 3.1e-88 328.9 201 73.6
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 5.3e-88 328.2 201 74.1
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 5.3e-88 328.2 201 71.6
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 5.3e-88 328.2 201 71.6
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 9.0e-88 327.4 201 71.6
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 1.2e-87 327.0 201 72.6
FAN02G0764 Fragaria x ananassa HOM05D006085 ORTHO05D007559 1.5e-87 326.6 212 70.3
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 2.0e-87 326.2 201 73.1
Glyma.12G116400 Glycine max HOM05D006085 ORTHO05D007559 3.4e-87 325.5 201 71.6
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 1.3e-86 323.6 201 72.1
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 1.3e-86 323.6 203 70.4
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 1.7e-86 323.2 201 73.1
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 1.7e-86 323.2 212 69.8
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 4.9e-86 321.6 212 69.8
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 9.3e-85 317.4 212 68.4
CDE04G1826 Ceratophyllum demersum HOM05D006085 ORTHO05D007559 9.3e-85 317.4 203 70.4
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 9.3e-85 317.4 206 70.9
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 1.2e-84 317.0 212 68.4
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 1.2e-84 317.0 201 71.1
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 1.0e-83 313.9 201 72.1
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 1.3e-83 313.5 203 70.9
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 2.3e-83 312.8 203 70.4
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 3.0e-83 312.4 203 72.4
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 5.1e-83 311.6 203 70.9
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 6.7e-83 311.2 202 68.8
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 8.7e-83 310.8 203 71.4
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 1.1e-82 310.5 203 70.4
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 1.9e-82 309.7 202 71.3
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 2.5e-82 309.3 189 71.4
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 7.4e-82 307.8 203 70.9
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 7.4e-82 307.8 201 68.7
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 9.6e-82 307.4 201 70.6
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 2.8e-81 305.8 201 69.2
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 3.7e-81 305.4 231 61.0
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 3.7e-81 305.4 203 70.9
Prupe.3G139600 Prunus persica HOM05D006085 ORTHO05D007559 8.1e-81 304.3 195 70.8
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 4.0e-80 302.0 203 69.0
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 5.3e-80 301.6 201 67.7
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 6.9e-80 301.2 203 67.5
Eucgr.A01834 Eucalyptus grandis HOM05D006085 ORTHO05D007559 1.5e-79 300.1 201 68.2
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 1.5e-79 300.1 203 68.5
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 2.0e-79 299.7 201 67.2
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 3.4e-79 298.9 203 68.5
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 1.0e-78 297.4 203 69.5
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 1.7e-78 296.6 204 65.7
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 1.1e-77 293.9 225 62.7
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 5.5e-77 291.6 201 65.2
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 3.9e-75 285.4 265 54.0
Zm00001eb322380 Zea mays HOM05D006085 ORTHO05D007559 1.5e-71 273.5 201 63.7
Os07g0508500 Oryza sativa ssp. japonica HOM05D006085 ORTHO05D007559 4.5e-71 271.9 201 61.2
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 1.7e-70 270.0 201 62.7
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 8.4e-70 267.7 201 61.7
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 1.3e-67 260.4 201 62.7
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 5.9e-63 245.0 203 58.1
Pp3c20_12130 Physcomitrium patens HOM05D006085 ORTHO05D007559 2.2e-62 243.0 202 54.5
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 3.2e-61 239.2 202 54.5
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 2.7e-60 236.1 201 61.2
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 5.1e-59 231.9 201 56.2
AagrBONN_evm.TU.Sc2ySwM_228.5266 Anthoceros agrestis HOM05D006085 ORTHO05D007559 4.3e-58 228.8 202 52.0
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 2.2e-57 226.5 201 57.2
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 4.1e-56 222.2 201 53.7
arahy.Tifrunner.gnm1.ann1.9UNY9A Arachis hypogaea HOM05D006085 ORTHO05D007559 6.9e-56 221.5 201 53.7
Nitab4.5_0000638g0100 Nicotiana tabacum HOM05D006085 ORTHO05D007559 3.4e-55 219.2 152 65.8
Cc05_g07490 Coffea canephora HOM05D006085 ORTHO05D007559 7.7e-55 218.0 167 61.7
CBR_g48499 Chara braunii HOM05D006085 ORTHO05D007559 1.7e-46 190.3 204 42.6
Nitab4.5_0001752g0030 Nicotiana tabacum HOM05D006085 ORTHO05D007559 7.5e-42 174.9 108 71.3
TPR.G31028 Trifolium pratense HOM05D006085 ORTHO05D007559 1.7e-38 163.7 87 79.3
MCO16G047 Micromonas commoda HOM05D006085 ORTHO05D007559 5.0e-38 162.2 193 41.5
TPR.G23020 Trifolium pratense HOM05D006085 ORTHO05D007559 8.8e-27 124.8 70 75.7
TPR.G6860 Trifolium pratense HOM05D006085 ORTHO05D007559 2.4e-24 116.7 96 62.5
TPR.G28910 Trifolium pratense HOM05D006085 ORTHO05D007559 1.6e-23 114.0 63 77.8
Cc00_g12330 Coffea canephora HOM05D006085 ORTHO05D007559 2.9e-22 109.8 111 46.8
Cc00_g12340 Coffea canephora HOM05D006085 ORTHO05D007559 1.8e-11 73.9 65 53.8


User provided reference genes

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