Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G145812 Manihot esculenta HOM05D006085 ORTHO05D007559 9.6e-112 406.8 193 100.0
Manes.13G145813 Manihot esculenta HOM05D006085 ORTHO05D007559 1.4e-91 339.7 166 95.2
Manes.13G145816 Manihot esculenta HOM05D006085 ORTHO05D007559 3.5e-90 335.1 167 94.6
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 2.5e-88 328.9 170 90.0
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 5.3e-78 294.7 170 80.0
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 3.4e-77 292.0 170 75.9
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 5.9e-77 291.2 170 75.3
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 7.7e-77 290.8 170 77.1
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 1.0e-76 290.4 170 77.1
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 1.7e-76 289.7 166 84.3
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 5.0e-76 288.1 170 75.9
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 2.7e-74 282.3 170 73.5
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 4.6e-74 281.6 170 71.8
Ca_18934_v3 Cicer arietinum L. HOM05D006085 ORTHO05D007559 7.9e-74 280.8 170 72.9
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 1.0e-73 280.4 170 75.9
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 1.4e-73 280.0 170 74.1
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 2.3e-73 279.3 181 69.1
Lj8C109T7 Lonicera japonica HOM05D006085 ORTHO05D007559 3.0e-73 278.9 170 74.1
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 5.1e-73 278.1 170 75.3
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 8.8e-73 277.3 170 72.9
Sed0017729 Sechium edule HOM05D006085 ORTHO05D007559 1.5e-72 276.6 171 70.2
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 2.0e-72 276.2 170 73.5
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 2.0e-72 276.2 170 74.7
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 2.5e-72 275.8 181 70.2
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 3.3e-72 275.4 170 71.2
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 3.3e-72 275.4 170 72.4
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 4.3e-72 275.0 170 73.5
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 5.7e-72 274.6 159 76.1
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 7.4e-72 274.2 172 72.1
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 1.3e-71 273.5 170 71.2
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 2.2e-71 272.7 170 71.8
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 2.8e-71 272.3 170 72.9
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 4.8e-71 271.6 170 72.4
Glyma.12G116400 Glycine max HOM05D006085 ORTHO05D007559 6.3e-71 271.2 170 71.2
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 1.8e-70 269.6 170 71.8
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 2.4e-70 269.2 170 70.0
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 2.4e-70 269.2 170 70.0
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 2.4e-70 269.2 170 68.8
FAN02G0764 Fragaria x ananassa HOM05D006085 ORTHO05D007559 2.4e-70 269.2 181 67.4
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 2.4e-70 269.2 170 69.4
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 3.1e-70 268.9 170 70.0
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 4.1e-70 268.5 170 70.6
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 5.3e-70 268.1 172 69.2
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 6.9e-70 267.7 170 67.6
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 6.9e-70 267.7 196 64.3
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 9.1e-70 267.3 170 70.6
Eucgr.A01834 Eucalyptus grandis HOM05D006085 ORTHO05D007559 9.1e-70 267.3 166 71.7
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 9.1e-70 267.3 170 69.4
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 9.1e-70 267.3 170 69.4
Prupe.3G139600 Prunus persica HOM05D006085 ORTHO05D007559 1.2e-69 266.9 182 66.5
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 2.6e-69 265.8 170 69.4
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 2.6e-69 265.8 181 66.9
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 5.9e-69 264.6 181 66.3
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 2.9e-68 262.3 170 69.4
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 3.8e-68 261.9 175 68.6
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 5.0e-68 261.5 170 69.4
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 1.1e-67 260.4 170 68.2
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 1.9e-67 259.6 181 65.2
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 2.5e-67 259.2 181 65.2
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 3.2e-67 258.8 172 69.8
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 5.5e-67 258.1 160 71.2
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 2.1e-66 256.1 170 68.8
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 2.1e-66 256.1 171 69.6
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 3.6e-66 255.4 172 69.8
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 4.7e-66 255.0 172 70.3
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 4.7e-66 255.0 172 68.6
CDE04G1826 Ceratophyllum demersum HOM05D006085 ORTHO05D007559 3.0e-65 252.3 170 67.1
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 3.9e-65 251.9 170 68.8
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 3.9e-65 251.9 170 65.9
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 5.1e-65 251.5 200 59.0
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 6.7e-65 251.1 172 67.4
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 2.0e-64 249.6 172 68.6
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 3.3e-64 248.8 172 67.4
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 5.7e-64 248.1 170 65.9
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 7.4e-64 247.7 172 65.7
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.3e-63 246.9 172 66.3
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 1.3e-63 246.9 172 66.9
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 1.7e-63 246.5 170 64.1
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 3.7e-63 245.4 172 66.9
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 4.8e-63 245.0 170 63.5
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 8.2e-63 244.2 159 67.3
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 8.2e-63 244.2 172 68.0
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 1.1e-62 243.8 172 65.7
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 1.4e-62 243.4 192 61.5
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 3.1e-62 242.3 160 67.5
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 9.1e-62 240.7 155 69.0
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 5.5e-59 231.5 223 52.5
Zm00001eb322380 Zea mays HOM05D006085 ORTHO05D007559 4.4e-56 221.9 170 60.0
Os07g0508500 Oryza sativa ssp. japonica HOM05D006085 ORTHO05D007559 1.3e-55 220.3 170 58.2
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 4.1e-54 215.3 170 60.0
Pp3c20_12130 Physcomitrium patens HOM05D006085 ORTHO05D007559 5.5e-51 204.9 163 56.4
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 1.2e-50 203.8 170 55.9
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 2.1e-50 203.0 170 58.2
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 8.0e-50 201.1 160 56.2
AagrBONN_evm.TU.Sc2ySwM_228.5266 Anthoceros agrestis HOM05D006085 ORTHO05D007559 1.2e-45 187.2 160 51.9
Nitab4.5_0000638g0100 Nicotiana tabacum HOM05D006085 ORTHO05D007559 7.7e-45 184.5 135 63.0
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 5.5e-43 178.3 170 52.9
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 9.4e-43 177.6 170 55.9
Nitab4.5_0001752g0030 Nicotiana tabacum HOM05D006085 ORTHO05D007559 2.3e-41 172.9 107 71.0
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 5.7e-40 168.3 170 50.0
Cc05_g07490 Coffea canephora HOM05D006085 ORTHO05D007559 7.5e-40 167.9 137 58.4
arahy.Tifrunner.gnm1.ann1.9UNY9A Arachis hypogaea HOM05D006085 ORTHO05D007559 9.8e-40 167.5 170 50.0
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 8.3e-39 164.5 159 53.5
TPR.G31028 Trifolium pratense HOM05D006085 ORTHO05D007559 5.4e-38 161.8 86 79.1
CBR_g48499 Chara braunii HOM05D006085 ORTHO05D007559 1.9e-35 153.3 166 41.6
MCO16G047 Micromonas commoda HOM05D006085 ORTHO05D007559 5.5e-35 151.8 159 44.7
TPR.G23020 Trifolium pratense HOM05D006085 ORTHO05D007559 2.8e-26 122.9 69 75.4
Cc00_g12330 Coffea canephora HOM05D006085 ORTHO05D007559 9.2e-22 107.8 110 46.4
TPR.G28910 Trifolium pratense HOM05D006085 ORTHO05D007559 5.6e-19 98.6 62 71.0
TPR.G6860 Trifolium pratense HOM05D006085 ORTHO05D007559 7.3e-19 98.2 72 68.1


User provided reference genes

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