Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 1.2e-43 179.5 92 100.0
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 9.5e-17 90.1 100 60.0
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 6.1e-16 87.4 95 61.1
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 1.0e-15 86.7 86 64.0
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 8.8e-15 83.6 99 55.6
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 5.4e-12 74.3 91 53.8
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 9.2e-12 73.6 89 51.7
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 2.0e-11 72.4 91 49.5
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.3e-10 69.7 84 51.2
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 2.9e-10 68.6 91 48.4
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 5.0e-10 67.8 96 50.0
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 8.6e-10 67.0 82 48.8
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.5e-09 66.2 89 51.7
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 1.5e-09 66.2 80 51.2
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.9e-09 65.9 84 42.9
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 3.3e-09 65.1 101 44.6
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 4.3e-09 64.7 100 49.0
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 4.3e-09 64.7 87 46.0
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 4.3e-09 64.7 93 52.7
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 4.3e-09 64.7 93 52.7
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 5.6e-09 64.3 91 49.5
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 5.6e-09 64.3 93 52.7
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 5.6e-09 64.3 89 46.1
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 5.6e-09 64.3 88 47.7
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.2e-08 63.2 90 45.6
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 1.6e-08 62.8 102 42.2
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 2.8e-08 62.0 83 41.0
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 2.8e-08 62.0 84 44.0
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 3.6e-08 61.6 89 44.9
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 3.6e-08 61.6 83 43.4
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 3.6e-08 61.6 90 43.3
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 3.6e-08 61.6 86 50.0
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 3.6e-08 61.6 87 52.9
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 4.7e-08 61.2 89 43.8
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 4.7e-08 61.2 85 41.2
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 1.0e-07 60.1 86 51.2
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 1.4e-07 59.7 87 42.5
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 6.8e-07 57.4 92 47.8
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 8.9e-07 57.0 99 45.5
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 1.5e-06 56.2 84 44.0
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 2.6e-06 55.5 42 57.1
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 3.4e-06 55.1 85 43.5
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 3.4e-06 55.1 92 42.4
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 4.4e-06 54.7 87 44.8
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 4.4e-06 54.7 71 40.8
Hund15081 Selenicereus undatus HOM05D036338 ORTHO05D008758 4.4e-06 54.7 83 39.8
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 5.7e-06 54.3 85 44.7
Dinv25035 Davidia involucrata HOM05D039163 ORTHO05D008758 7.5e-06 53.9 97 36.1
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 9.8e-06 53.5 80 45.0


User provided reference genes

Program Settings