Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 6.4e-118 427.6 237 100.0
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.9e-63 245.0 246 61.0
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 7.7e-63 244.6 246 61.4
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 5.5e-61 238.4 245 58.4
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 9.4e-61 237.7 246 59.8
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.1e-53 214.2 239 57.3
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 5.5e-53 211.8 245 54.3
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 2.6e-50 203.0 243 53.1
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 3.7e-49 199.1 239 51.9
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.5e-45 186.4 246 53.7
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 4.7e-44 182.2 241 48.5
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 5.2e-43 178.7 256 50.0
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 8.9e-43 177.9 241 49.4
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 1.2e-42 177.6 246 53.7
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.6e-42 176.4 242 50.4
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.7e-41 173.7 241 49.8
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.7e-41 173.7 241 52.3
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 6.0e-39 165.2 235 52.8
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.7e-38 163.7 242 50.0
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 3.9e-38 162.5 244 48.8
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 6.6e-38 161.8 244 48.4
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 2.5e-37 159.8 248 45.2
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 1.2e-36 157.5 249 49.4
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 2.3e-35 153.3 247 45.3
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 4.0e-35 152.5 247 43.3
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 8.9e-35 151.4 253 44.7
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 2.0e-34 150.2 238 45.0
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 2.6e-34 149.8 254 48.8
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.3e-33 147.5 239 44.4
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 4.9e-33 145.6 255 41.2
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 4.9e-33 145.6 244 48.4
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 8.3e-33 144.8 255 42.7
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 8.3e-33 144.8 230 48.3
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 2.1e-31 140.2 243 42.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 2.7e-31 139.8 237 44.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 7.8e-31 138.3 198 48.5
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 7.8e-31 138.3 246 44.3
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 1.0e-30 137.9 246 43.9
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.7e-30 137.1 246 45.5
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 3.0e-30 136.3 257 41.6
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 5.1e-30 135.6 250 44.4
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 6.6e-30 135.2 243 42.0
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 6.6e-30 135.2 243 41.6
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 6.6e-30 135.2 243 42.0
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 6.6e-30 135.2 243 42.0
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 8.6e-30 134.8 238 47.1
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 4.3e-29 132.5 234 44.4
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 4.3e-29 132.5 255 42.0
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 5.6e-29 132.1 220 48.6
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 7.3e-29 131.7 255 45.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.2e-28 131.0 262 43.5
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 6.2e-28 128.6 193 48.2
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.8e-27 127.1 258 39.5
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 2.3e-27 126.7 237 48.5
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 2.3e-27 126.7 232 41.8
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 3.1e-27 126.3 193 47.2
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 4.0e-27 125.9 245 42.4
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 6.8e-27 125.2 252 42.5
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 8.9e-27 124.8 241 45.2
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.4e-26 122.9 254 39.0
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 7.6e-26 121.7 237 43.0
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 9.9e-26 121.3 254 40.9
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 9.9e-26 121.3 260 38.8
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 9.9e-26 121.3 239 42.7
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.7e-25 120.6 173 48.6
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 3.7e-25 119.4 242 43.0
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 3.7e-25 119.4 223 41.3
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 6.4e-25 118.6 185 46.5
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 4.1e-24 115.9 239 46.4
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.2e-23 114.4 238 39.5
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.2e-23 114.4 244 41.0
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.1e-23 113.6 261 39.8
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.0e-22 111.3 238 41.6
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 5.1e-22 109.0 189 42.3
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 1.9e-21 107.1 185 44.9
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 1.9e-21 107.1 237 46.0
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 2.5e-21 106.7 257 39.3
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 5.6e-21 105.5 213 40.4
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 9.6e-21 104.8 235 40.9
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.6e-20 104.0 255 40.4
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 6.2e-20 102.1 262 36.6
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 2.0e-18 97.1 211 37.9
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.7e-17 94.0 182 42.9
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 1.7e-17 94.0 175 44.6
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.2e-17 93.6 185 45.9
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.1e-16 91.3 172 47.1
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 9.3e-16 88.2 261 33.0
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 5.6e-13 79.0 241 33.2
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 2.4e-11 73.6 143 37.1
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 4.0e-11 72.8 129 45.7
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 9.9e-10 68.2 107 46.7
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 2.2e-09 67.0 139 41.0
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.9e-08 63.9 253 33.6
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 1.2e-07 61.2 137 36.5
BraA09t40219Z Brassica rapa HOM05D007603 ORTHO05D009604 3.9e-06 56.2 111 40.5


User provided reference genes

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