Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.3e-183 646.4 342 100.0
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 1.6e-122 443.4 345 68.7
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 5.8e-120 434.9 345 65.2
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 1.3e-119 433.7 345 66.4
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 4.2e-118 428.7 345 64.3
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.9e-110 403.3 329 68.1
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 2.4e-110 402.9 345 65.5
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 2.1e-109 399.8 334 64.4
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 2.1e-109 399.8 345 65.8
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 4.6e-109 398.7 342 61.7
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.9e-107 393.3 345 60.0
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.5e-107 392.9 333 62.2
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 3.3e-107 392.5 345 64.3
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 1.6e-106 390.2 345 59.4
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 3.7e-106 389.0 345 64.6
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.4e-105 386.3 345 59.7
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 4.0e-105 385.6 346 60.7
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 5.3e-105 385.2 345 62.3
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 7.6e-104 381.3 334 61.1
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.7e-103 380.2 345 63.8
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 4.9e-103 378.6 343 63.8
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 6.5e-103 378.3 312 59.9
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 8.4e-103 377.9 330 59.7
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.4e-102 377.1 345 57.7
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.4e-102 377.1 344 62.5
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.2e-102 375.9 309 61.2
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 4.2e-102 375.6 341 63.3
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 1.2e-101 374.0 335 57.3
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 7.9e-101 371.3 330 58.5
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.8e-100 370.2 345 58.0
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.8e-100 370.2 345 57.7
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 5.1e-100 368.6 337 62.6
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 6.7e-100 368.2 339 62.2
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.1e-99 367.5 338 63.0
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.5e-99 367.1 345 61.7
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.9e-99 366.7 346 57.5
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 2.5e-99 366.3 316 59.5
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 4.3e-99 365.5 345 61.2
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.3e-98 364.0 322 58.1
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.3e-98 364.0 346 60.4
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.6e-98 363.6 342 61.1
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 3.7e-98 362.5 345 59.4
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.7e-98 362.5 331 62.8
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 6.3e-98 361.7 340 60.3
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 6.3e-98 361.7 345 61.2
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 8.2e-98 361.3 347 58.2
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.4e-97 360.5 350 60.3
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 3.1e-97 359.4 345 58.6
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.1e-97 359.0 351 56.1
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 6.9e-97 358.2 338 62.1
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 2.0e-96 356.7 345 57.7
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.1e-94 350.9 316 57.0
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 1.9e-94 350.1 308 66.9
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 2.5e-94 349.7 340 60.0
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 7.2e-94 348.2 347 52.7
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 3.6e-93 345.9 338 60.1
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 6.7e-92 341.7 323 60.7
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 6.7e-92 341.7 316 62.0
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 3.7e-90 335.9 336 56.5
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 1.5e-88 330.5 324 59.3
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 2.0e-88 330.1 328 58.8
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 3.4e-88 329.3 323 53.6
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 5.9e-88 328.6 323 58.8
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.3e-87 327.4 343 52.5
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 2.9e-87 326.2 323 58.5
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 6.5e-87 325.1 328 57.9
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.1e-86 324.3 354 50.6
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 1.4e-86 323.9 321 58.3
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.9e-86 323.6 317 55.5
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 4.2e-86 322.4 319 58.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 5.5e-86 322.0 321 57.6
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 9.4e-86 321.2 343 50.4
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 2.7e-85 319.7 332 56.3
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.1e-85 318.5 312 57.4
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-84 317.0 318 57.5
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 3.0e-84 316.2 326 54.0
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.1e-83 314.3 319 57.4
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.1e-83 314.3 319 57.4
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 7.4e-83 311.6 319 57.1
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 9.7e-83 311.2 319 57.1
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 9.7e-83 311.2 345 55.1
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 3.7e-82 309.3 319 56.7
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 4.8e-82 308.9 343 48.7
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 1.4e-81 307.4 316 52.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.4e-80 302.8 324 52.2
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 8.5e-79 298.1 321 51.1
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.4e-78 297.4 269 58.0
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.4e-73 280.0 314 55.1
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.5e-70 270.8 318 51.6
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 3.6e-69 266.2 311 46.3
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.8e-65 253.8 230 62.2
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 7.7e-64 248.4 242 56.2
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.2e-62 242.7 186 66.7
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 3.0e-52 209.9 161 65.2
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 5.9e-48 195.7 155 63.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.1e-46 191.4 186 57.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 1.8e-36 157.5 167 53.3
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.1e-30 138.3 113 60.2
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.5e-30 137.9 99 66.7
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 9.9e-27 125.2 183 50.3
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.2e-24 118.2 167 42.5
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 4.4e-19 99.8 133 42.1
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 4.9e-18 96.3 108 51.9
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 4.2e-17 93.2 139 42.4
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 7.6e-11 72.4 76 51.3
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 4.3e-06 56.6 169 24.9
Sabra02G0188800 Salix brachista HOM05D007486 ORTHO05D003673 5.6e-06 56.2 169 25.4


User provided reference genes

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