Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 6.9e-60 234.2 157 100.0
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 2.1e-32 142.9 170 70.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 1.8e-31 139.8 162 72.2
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.2e-30 137.1 164 74.4
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 4.4e-30 135.2 170 68.8
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 4.1e-28 128.6 144 71.5
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 9.1e-28 127.5 145 74.5
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.7e-26 123.2 165 67.9
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 5.0e-26 121.7 162 59.9
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 6.5e-26 121.3 141 73.0
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.5e-25 119.4 171 65.5
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 3.2e-25 119.0 160 67.5
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 5.5e-25 118.2 169 66.9
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 7.2e-25 117.9 128 77.3
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.4e-25 117.5 164 62.8
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.6e-24 116.7 164 67.1
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.6e-24 116.7 159 66.0
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.6e-24 116.7 166 67.5
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 2.7e-24 115.9 158 67.1
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 3.6e-24 115.5 160 66.9
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 6.1e-24 114.8 164 63.4
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.0e-23 114.0 170 67.1
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.4e-23 113.6 170 64.7
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.4e-23 113.6 158 67.1
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.4e-23 113.6 170 66.5
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.8e-23 113.2 155 63.9
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.8e-23 113.2 160 64.4
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 4.0e-23 112.1 173 64.2
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 4.0e-23 112.1 166 65.7
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 5.2e-23 111.7 156 65.4
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 6.8e-23 111.3 157 66.9
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 6.8e-23 111.3 157 66.9
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 8.8e-23 110.9 168 64.3
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 8.8e-23 110.9 162 64.2
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 8.8e-23 110.9 174 63.8
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.2e-22 110.5 144 66.7
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.2e-22 110.5 162 64.2
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.2e-22 110.5 162 64.2
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.5e-22 110.2 155 68.4
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.5e-22 110.2 155 68.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.4e-22 109.0 163 62.0
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.4e-22 109.0 163 62.0
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 3.4e-22 109.0 158 63.9
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 3.4e-22 109.0 159 66.0
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 4.4e-22 108.6 155 68.4
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 4.4e-22 108.6 171 66.1
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 5.7e-22 108.2 155 67.7
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 7.5e-22 107.8 152 69.1
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.5e-22 107.8 153 63.4
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.7e-21 106.7 165 63.6
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.8e-21 105.9 165 63.6
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 3.7e-21 105.5 164 62.2
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.8e-21 105.1 163 60.7
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 6.3e-21 104.8 138 68.1
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 8.3e-21 104.4 165 63.0
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.1e-20 104.0 164 61.6
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 2.4e-20 102.8 163 61.3
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 3.1e-20 102.4 157 66.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 3.1e-20 102.4 156 62.8
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.1e-20 102.1 158 61.4
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 9.1e-20 100.9 154 64.3
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 1.2e-19 100.5 167 62.3
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 2.0e-19 99.8 163 60.7
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.7e-19 99.4 123 74.8
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 4.5e-19 98.6 216 50.0
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 4.5e-19 98.6 160 56.2
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 1.3e-18 97.1 123 69.9
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.3e-18 97.1 134 69.4
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.3e-18 97.1 166 62.7
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 3.8e-18 95.5 149 61.7
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 8.6e-18 94.4 166 62.0
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.5e-17 92.8 139 64.7
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 4.2e-17 92.0 161 60.2
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 5.5e-17 91.7 166 60.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 5.5e-17 91.7 139 64.0
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.5e-17 91.7 121 70.2
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 9.5e-17 90.9 140 61.4
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 1.2e-16 90.5 152 62.5
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 1.2e-16 90.5 152 63.2
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.6e-16 90.1 171 57.9
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 3.6e-16 89.0 157 61.1
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 6.1e-16 88.2 159 59.1
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.0e-15 87.4 171 59.1
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 2.3e-15 86.3 120 61.7
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 5.2e-15 85.1 164 56.1
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 8.9e-15 84.3 123 63.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.5e-14 83.6 153 60.8
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 3.4e-14 82.4 146 61.0
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 9.8e-14 80.9 96 78.1
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 9.8e-14 80.9 141 57.4
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 2.8e-13 79.3 134 46.3
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.7e-13 79.0 154 59.7
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 6.3e-13 78.2 126 51.6
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.8e-12 76.6 148 53.4
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.6e-11 73.6 102 75.5
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 2.0e-11 73.2 156 57.1
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 2.3e-10 69.7 109 65.1
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 6.6e-10 68.2 165 51.5
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.5e-09 67.0 152 42.8
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.2e-08 63.9 167 49.1
TWI09G1014 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 8.0e-08 61.2 82 82.9
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 2.6e-06 56.2 129 53.5


User provided reference genes

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