Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G118801 Manihot esculenta HOM05D008251 ORTHO05D010450 9.1e-34 146.4 75 100.0
Manes.13G118700 Manihot esculenta HOM05D008251 ORTHO05D010450 1.6e-30 135.6 75 92.0
MD02G1178400 Malus domestica HOM05D008251 ORTHO05D010450 3.6e-14 81.3 81 58.0
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 1.3e-11 72.8 82 53.7
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 3.7e-11 71.2 82 53.7
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 3.7e-11 71.2 82 53.7
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 3.7e-11 71.2 82 53.7
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 3.7e-11 71.2 81 50.6
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 1.4e-10 69.3 82 52.4
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 2.4e-10 68.6 75 54.7
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 2.0e-09 65.5 75 54.7
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 2.7e-09 65.1 81 49.4
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 2.7e-09 65.1 81 49.4
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 2.7e-09 65.1 81 49.4
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 7.7e-09 63.5 75 57.3
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 1.7e-08 62.4 81 49.4
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 2.2e-08 62.0 59 66.1
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 3.8e-08 61.2 82 48.8
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 3.8e-08 61.2 58 63.8
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 3.8e-08 61.2 81 45.7
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 5.0e-08 60.8 59 57.6
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 6.5e-08 60.5 58 63.8
PGSC0003DMG400024956 Solanum tuberosum HOM05D008251 ORTHO05D010450 1.5e-07 59.3 75 52.0
CAN.G370.14 Capsicum annuum HOM05D008251 ORTHO05D010450 1.9e-07 58.9 84 47.6
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 2.5e-07 58.5 82 48.8
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 2.5e-07 58.5 57 61.4
Gohir.A11G196800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 3.2e-07 58.2 71 50.7
Ciclev10027375m.g Citrus clementina HOM05D008251 ORTHO05D010450 4.2e-07 57.8 84 46.4
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 5.5e-07 57.4 54 59.3
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 7.2e-07 57.0 74 45.9
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 7.2e-07 57.0 69 50.7
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 1.6e-06 55.8 85 44.7
Gohir.D12G071900 Gossypium hirsutum HOM05D008251 ORTHO05D010450 2.1e-06 55.5 64 50.0
TWI73G1017 Tripterygium wilfordii HOM05D008251 ORTHO05D010450 2.1e-06 55.5 77 46.8
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 6.1e-06 53.9 76 44.7
Gorai.007G217500 Gossypium raimondii HOM05D008251 ORTHO05D010450 6.1e-06 53.9 71 46.5
SGA_v2.0_scaffold15G07364 Striga asiatica HOM05D000033 ORTHO05D002493 6.1e-06 53.9 56 51.8
QL05p026832 Quercus lobata HOM05D008251 ORTHO05D010450 8.0e-06 53.5 57 54.4


User provided reference genes

Program Settings