Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 2.4e-257 891.7 471 100.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.0e-46 191.0 161 56.5
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 4.2e-44 183.3 161 55.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 4.6e-43 179.9 154 56.5
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.5e-41 174.9 161 50.9
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 3.7e-40 170.2 163 54.0
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 3.7e-40 170.2 165 51.5
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 2.4e-39 167.5 158 51.9
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 5.9e-38 162.9 161 50.9
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 1.7e-37 161.4 161 52.2
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.2e-37 161.0 160 47.5
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 3.8e-37 160.2 161 49.1
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 3.8e-37 160.2 163 49.1
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 1.4e-36 158.3 152 50.7
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 5.5e-36 156.4 161 48.4
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 1.6e-35 154.8 149 51.7
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 3.6e-35 153.7 156 48.7
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.0e-34 152.1 153 51.6
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 1.8e-34 151.4 160 49.4
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 1.8e-34 151.4 162 46.9
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 2.3e-34 151.0 160 49.4
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 3.0e-34 150.6 161 49.1
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 3.9e-34 150.2 160 49.4
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 5.1e-34 149.8 157 48.4
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 8.8e-34 149.1 160 48.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.1e-33 148.7 152 50.0
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.5e-33 148.3 162 48.1
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.5e-33 148.3 158 47.5
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 2.0e-33 147.9 159 47.2
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 2.0e-33 147.9 160 49.4
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 4.4e-33 146.7 157 47.1
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 4.4e-33 146.7 165 49.7
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 7.4e-33 146.0 157 49.7
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 9.7e-33 145.6 150 48.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 1.3e-32 145.2 160 47.5
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 2.2e-32 144.4 156 48.7
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 2.2e-32 144.4 161 47.2
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 4.8e-32 143.3 173 46.2
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 8.2e-32 142.5 160 45.6
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 1.1e-31 142.1 139 49.6
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.8e-31 141.4 162 42.0
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.5e-30 138.3 166 45.8
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 2.6e-30 137.5 175 45.7
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.5e-30 137.1 172 44.8
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.5e-30 137.1 172 44.8
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 7.7e-30 136.0 151 46.4
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.0e-29 135.6 153 46.4
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.3e-29 135.2 168 44.6
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.2e-29 134.4 168 44.6
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 5.0e-29 133.3 165 43.0
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 6.5e-29 132.9 208 38.9
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 1.5e-28 131.7 158 44.9
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 1.9e-28 131.3 177 40.7
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 2.5e-28 131.0 191 38.7
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 3.2e-28 130.6 148 46.6
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 7.2e-28 129.4 163 43.6
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 1.2e-27 128.6 159 43.4
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 2.7e-27 127.5 159 44.7
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.7e-27 127.5 148 41.9
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 1.0e-26 125.6 141 42.6
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.0e-26 125.6 158 42.4
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.4e-26 125.2 141 41.1
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.4e-26 125.2 146 41.1
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 3.9e-26 123.6 155 40.0
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.0e-25 121.3 164 42.1
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 2.6e-25 120.9 152 40.8
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 3.3e-25 120.6 158 41.8
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 3.3e-25 120.6 158 42.4
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 5.7e-25 119.8 151 43.7
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 5.7e-25 119.8 160 41.9
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 7.4e-25 119.4 138 44.9
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.7e-24 118.2 141 38.3
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 4.8e-24 116.7 156 39.7
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 8.2e-24 115.9 147 43.5
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 1.4e-23 115.2 147 39.5
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 5.3e-23 113.2 163 37.4
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 1.6e-22 111.7 175 35.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 4.5e-22 110.2 160 43.1
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 4.5e-22 110.2 165 34.5
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 1.0e-21 109.0 170 36.5
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.3e-21 108.6 118 47.5
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.5e-20 105.1 153 33.3
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.2e-19 102.1 131 42.0
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 2.1e-19 101.3 182 37.4
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.7e-19 100.9 92 52.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 4.7e-19 100.1 200 32.0
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 6.1e-19 99.8 161 39.8
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 8.0e-19 99.4 151 41.7
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 8.0e-19 99.4 151 41.7
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.8e-18 98.2 138 39.9
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 5.7e-17 93.2 160 27.5
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 3.7e-16 90.5 104 45.2
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 4.8e-16 90.1 101 42.6
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 6.3e-16 89.7 101 42.6
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 3.1e-15 87.4 112 39.3
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.5e-14 84.0 139 33.8
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 5.9e-14 83.2 166 34.9
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 7.7e-14 82.8 149 33.6
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 2.9e-13 80.9 97 45.4
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 2.9e-13 80.9 137 37.2
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 6.5e-13 79.7 99 42.4
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.5e-12 78.6 104 38.5
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 4.2e-12 77.0 95 46.3
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 1.6e-11 75.1 89 42.7
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 2.1e-11 74.7 110 43.6
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.1e-11 74.7 144 33.3
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 2.7e-11 74.3 92 46.7
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.7e-11 74.3 103 39.8
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 6.1e-11 73.2 107 43.9
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 5.2e-10 70.1 140 32.1
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 8.8e-10 69.3 87 39.1
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 1.5e-09 68.6 110 40.0
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.5e-09 68.6 152 31.6
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.8e-08 64.3 150 32.0
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 4.9e-08 63.5 65 43.1
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 8.3e-08 62.8 139 27.3
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 8.3e-08 62.8 154 27.9
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 2.4e-07 61.2 63 55.6


User provided reference genes

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