Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G106500 Manihot esculenta HOM05D008539 ORTHO05D010637 0.0e+00 1105.1 552 100.0
Haze_03958 Corylus avellana HOM05D008539 ORTHO05D010637 1.6e-156 557.0 569 54.1
Cfa006803 Carpinus fangiana HOM05D000349 ORTHO05D000620 1.8e-150 537.0 571 53.6
Prupe.6G212800 Prunus persica HOM05D008539 ORTHO05D010637 1.4e-147 527.3 563 52.9
CiPaw.08G148100 Carya illinoinensis HOM05D008539 ORTHO05D010637 1.8e-126 457.2 567 48.1
Atru.chr3.1092 Acer truncatum HOM05D008539 ORTHO05D010637 7.4e-125 451.8 572 48.4
Gohir.A11G210466 Gossypium hirsutum HOM05D008539 ORTHO05D010637 3.1e-115 419.9 561 47.1
Dinv26981 Davidia involucrata HOM05D000349 ORTHO05D010637 2.9e-113 413.3 463 51.4
Ciclev10025260m.g Citrus clementina HOM05D008539 ORTHO05D010637 9.4e-112 408.3 532 47.0
Thecc.01G080200 Theobroma cacao HOM05D008539 ORTHO05D010637 2.3e-110 403.7 417 54.7
RcHm_v2.0_Chr2g0109471 Rosa chinensis HOM05D008539 ORTHO05D010637 4.8e-108 396.0 564 43.4
CANSAT01G2572 Cannabis sativa HOM05D008539 ORTHO05D010637 2.9e-105 386.7 599 44.2
FvH4_1g18650 Fragaria vesca HOM05D008539 ORTHO05D010637 2.9e-105 386.7 570 43.3
Gohir.D11G212700 Gossypium hirsutum HOM05D008539 ORTHO05D010637 2.7e-103 380.2 492 47.8
Gorai.007G228600 Gossypium raimondii HOM05D008539 ORTHO05D010637 8.0e-103 378.6 492 47.8
FAN26G2853 Fragaria x ananassa HOM05D008539 ORTHO05D010637 5.2e-102 375.9 561 43.1
FAN23G1883 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.7e-100 370.9 561 43.1
FAN28G0277 Fragaria x ananassa HOM05D008539 ORTHO05D010637 8.3e-100 368.6 563 42.5
QL06p038103 Quercus lobata HOM05D008539 ORTHO05D010637 4.1e-99 366.3 564 45.0
COL.COLO4_11651 Corchorus olitorius HOM05D008539 ORTHO05D010637 4.7e-95 352.8 544 43.4
Nn5g30717 Nelumbo nucifera HOM05D008539 ORTHO05D010637 8.8e-94 348.6 584 39.7
Potri.007G009000 Populus trichocarpa HOM05D008539 ORTHO05D010637 4.9e-84 316.2 503 42.1
PSO675G5298 Papaver somniferum HOM05D008539 ORTHO05D010637 3.2e-75 287.0 564 37.6
FAN19G1588 Fragaria x ananassa HOM05D008539 ORTHO05D010637 9.2e-75 285.4 587 37.3
PSO541G5024 Papaver somniferum HOM05D008539 ORTHO05D010637 2.3e-73 280.8 567 38.3
Hma1.2p1_1147F.1_g261540 Hydrangea macrophylla HOM05D008539 ORTHO05D010637 9.2e-67 258.8 507 38.1
MBI16_g05035_MAGBIO Magnolia biondii HOM05D008539 ORTHO05D010637 7.8e-66 255.8 562 35.1
ATR0767G189 Amborella trichopoda HOM05D008539 ORTHO05D010637 4.7e-63 246.5 549 35.5
Ciclev10007100m.g Citrus clementina HOM05D008539 ORTHO05D010637 4.0e-62 243.4 315 47.9
Glyma.01G197400 Glycine max HOM05D008539 ORTHO05D010637 5.2e-62 243.0 533 36.6
TAR628G0786 Trochodendron aralioides HOM05D008539 ORTHO05D010637 3.4e-61 240.4 270 50.0
TAR628G1178 Trochodendron aralioides HOM05D008539 ORTHO05D010637 2.1e-50 204.5 325 42.2
SEGI_19235 Sequoiadendron giganteum HOM05D008539 ORTHO05D010637 3.5e-50 203.8 625 31.8
Phvul.002G008000 Phaseolus vulgaris HOM05D008539 ORTHO05D010637 6.6e-49 199.5 533 32.8
ClCG01G017970 Citrullus lanatus HOM05D008539 ORTHO05D010637 1.5e-48 198.4 564 33.2
Lalb_Chr09g0323801 Lupinus albus HOM05D008539 ORTHO05D010637 7.3e-48 196.1 577 32.2
arahy.Tifrunner.gnm1.ann1.P8GH0J Arachis hypogaea HOM05D008539 ORTHO05D010637 9.6e-48 195.7 493 35.1
arahy.Tifrunner.gnm1.ann1.W1L6ST Arachis hypogaea HOM05D008539 ORTHO05D010637 9.6e-48 195.7 493 35.1
Sc07g0000280 Simmondsia chinensis HOM05D008539 ORTHO05D010637 2.4e-46 191.0 406 35.5
Cc07_g07630 Coffea canephora HOM05D008539 ORTHO05D010637 9.0e-46 189.1 414 34.1
Glyma.11G044300 Glycine max HOM05D008539 ORTHO05D010637 4.5e-45 186.8 367 39.5
Cpa.g.sc129.44 Carica papaya HOM05D008539 ORTHO05D010637 1.7e-44 184.9 300 43.7
Sabra07G0006900 Salix brachista HOM05D002093 ORTHO05D008902 1.4e-43 181.8 535 32.5
VMungo1215G1773 Vigna mungo HOM05D008539 ORTHO05D010637 3.5e-42 177.2 582 32.0
Sed0007885 Sechium edule HOM05D008539 ORTHO05D010637 6.7e-41 172.9 384 36.5
CsaV3_6G044500 Cucumis sativus L. HOM05D008539 ORTHO05D010637 5.6e-40 169.9 552 31.7
MELO3C007672.2 Cucumis melo HOM05D008539 ORTHO05D010637 2.8e-39 167.5 567 31.2
Medtr5g014750 Medicago truncatula HOM05D008539 ORTHO05D010637 1.5e-21 108.6 332 31.0
TPR.G28861 Trifolium pratense HOM05D008539 ORTHO05D010637 2.2e-20 104.8 373 32.2
Medtr5g014770 Medicago truncatula HOM05D008539 ORTHO05D010637 7.4e-16 89.7 297 29.6
Mapoly0011s0007 Marchantia polymorpha HOM05D008539 ORTHO05D010637 1.2e-13 82.4 493 24.3


User provided reference genes

Program Settings