Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.2e-43 179.5 97 100.0
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 7.1e-31 137.1 96 81.2
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 5.1e-29 131.0 97 76.3
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 2.8e-27 125.2 93 75.3
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.8e-27 125.2 97 73.2
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.8e-27 125.2 91 74.7
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.1e-27 123.6 97 72.2
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.1e-27 123.6 97 72.2
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.4e-26 122.9 97 72.2
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 2.0e-25 119.0 97 68.0
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.6e-25 118.6 91 72.5
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.8e-25 117.5 91 70.3
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.2e-24 115.5 92 72.8
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.2e-24 115.5 93 71.0
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 4.9e-24 114.4 99 69.7
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.9e-24 114.4 97 69.1
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 6.4e-24 114.0 92 68.5
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-24 114.0 92 68.5
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.1e-23 113.2 92 67.4
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.1e-23 113.2 92 67.4
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.4e-23 112.8 92 68.5
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.9e-23 112.5 97 68.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 2.4e-23 112.1 97 67.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 4.2e-23 111.3 97 67.0
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 4.2e-23 111.3 97 66.0
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 4.2e-23 111.3 97 66.0
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 7.1e-23 110.5 100 68.0
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 7.1e-23 110.5 99 69.7
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 9.3e-23 110.2 97 66.0
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.6e-22 109.4 94 68.1
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.6e-22 109.4 94 68.1
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.7e-22 108.6 97 64.9
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.7e-22 108.6 97 64.9
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.6e-22 107.8 91 67.0
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 6.0e-22 107.5 94 64.9
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.0e-21 106.7 92 66.3
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.8e-21 105.9 95 64.2
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.3e-21 105.5 105 61.9
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 2.3e-21 105.5 100 62.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 3.0e-21 105.1 98 65.3
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 3.9e-21 104.8 97 62.9
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 6.7e-21 104.0 99 62.6
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 6.7e-21 104.0 96 65.6
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.1e-20 103.2 95 66.3
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.1e-20 103.2 96 65.6
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 1.5e-20 102.8 91 65.9
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.9e-20 102.4 92 69.6
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.9e-20 102.4 97 63.9
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.6e-19 99.4 97 58.8
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.1e-19 99.0 92 62.0
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.1e-19 99.0 91 59.3
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 2.8e-19 98.6 97 59.8
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.2e-19 97.4 98 59.2
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.1e-18 96.7 93 63.4
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 3.1e-18 95.1 93 63.4
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 3.1e-18 95.1 92 60.9
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 4.0e-18 94.7 91 64.8
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 2.0e-17 92.4 99 57.6
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 3.4e-17 91.7 97 56.7
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 5.8e-17 90.9 97 55.7
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.7e-16 89.4 84 69.0
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 6.5e-16 87.4 86 58.1
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.4e-15 86.3 91 56.0
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.9e-15 85.9 74 71.6
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 2.5e-15 85.5 94 55.3
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 3.2e-15 85.1 72 66.7
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 5.5e-15 84.3 68 69.1
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 7.1e-15 84.0 92 52.2
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.6e-14 82.8 94 55.3
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.7e-14 82.0 66 69.7
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 7.9e-14 80.5 92 55.4
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 3.9e-13 78.2 94 50.0
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.1e-12 76.6 82 61.0
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.5e-12 76.3 99 50.5
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 1.2e-09 66.6 92 47.8
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 1.2e-09 66.6 92 52.2
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 2.0e-09 65.9 50 74.0


User provided reference genes

Program Settings