Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G173111 Manihot esculenta HOM05D000002 ORTHO05D001544 1.0e-44 183.3 113 100.0
Manes.13G090250 Manihot esculenta HOM05D000002 ORTHO05D001544 1.0e-44 183.3 113 100.0
Manes.08G076337 Manihot esculenta HOM05D000002 ORTHO05D001544 2.4e-22 109.0 95 61.1
Manes.08G062933 Manihot esculenta HOM05D000002 ORTHO05D001544 9.5e-19 97.1 62 77.4
SHI26812 Sapria himalayana HOM05D000002 ORTHO05D001544 2.0e-13 79.3 100 47.0
Thhalv10029482m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 7.8e-13 77.4 86 53.5
SHI29194 Sapria himalayana HOM05D008076 ORTHO05D001544 6.6e-12 74.3 77 48.1
Thhalv10005360m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 1.1e-11 73.6 73 54.8
SHI21781 Sapria himalayana HOM05D000002 ORTHO05D001544 1.5e-11 73.2 87 50.6
Thhalv10022495m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 1.9e-11 72.8 64 54.7
Thhalv10024012m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 3.3e-11 72.0 64 56.2
Sp5g20870 Schrenkiella parvula HOM05D000002 ORTHO05D001544 3.3e-11 72.0 75 54.7
ECA232G4084 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.3e-11 71.6 105 43.8
Thhalv10022479m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 4.3e-11 71.6 64 56.2
SHI13170 Sapria himalayana HOM05D000002 ORTHO05D001544 4.3e-11 71.6 84 48.8
ECA111G0001 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-11 71.2 98 40.8
SHI15516 Sapria himalayana HOM05D000002 ORTHO05D001544 5.6e-11 71.2 85 49.4
Manes.09G072919 Manihot esculenta HOM05D000002 ORTHO05D001544 1.2e-10 70.1 85 47.1
SHI08778 Sapria himalayana HOM05D000002 ORTHO05D001544 1.2e-10 70.1 73 50.7
ECA232G1205 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 69.7 105 43.8
ECA232G4978 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 69.7 98 40.8
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 69.7 106 42.5
ECA240G4648 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-10 69.3 106 42.5
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-10 69.3 105 42.9
ECA248G1621 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-10 69.3 98 39.8
COL.COLO4_09872 Corchorus olitorius HOM05D000002 ORTHO05D001544 2.8e-10 68.9 99 42.4
Manes.06G038551 Manihot esculenta HOM05D000002 ORTHO05D001544 2.8e-10 68.9 85 47.1
ECA240G2127 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-10 68.6 105 42.9
ECA240G4345 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-10 68.6 98 40.8
HanXRQChr06g0164281 Helianthus annuus HOM05D000002 ORTHO05D001544 3.6e-10 68.6 88 44.3
HanXRQChr01g0004521 Helianthus annuus HOM05D000002 ORTHO05D001544 4.7e-10 68.2 88 44.3
HanXRQChr02g0036901 Helianthus annuus HOM05D000002 ORTHO05D001544 4.7e-10 68.2 88 44.3
HanXRQChr12g0375451 Helianthus annuus HOM05D000002 ORTHO05D001544 4.7e-10 68.2 88 44.3
HanXRQChr15g0494961 Helianthus annuus HOM05D000002 ORTHO05D001544 4.7e-10 68.2 88 44.3
SHI15621 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-10 68.2 90 45.6
SHI20957 Sapria himalayana HOM05D000002 ORTHO05D001544 4.7e-10 68.2 84 48.8
ECA246G3038 Erigeron canadensis HOM05D000002 ORTHO05D001544 6.2e-10 67.8 98 40.8
ECA248G2941 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-10 67.8 98 39.8
SHI34117 Sapria himalayana HOM05D000002 ORTHO05D001544 6.2e-10 67.8 87 47.1
ECA233G1034 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.1e-10 67.4 105 41.9
ECA240G2383 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-10 67.4 98 40.8
ECA248G1189 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-10 67.4 105 41.9
ECA195G0003 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
ECA232G0182 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G0484 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G2406 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G3098 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G3275 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G4270 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA232G4563 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA233G1311 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
ECA233G1490 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA233G5329 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA234G0487 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA234G1360 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA234G4291 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA234G4634 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA236G1112 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
ECA236G3009 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA238G2637 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA240G0275 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA240G0584 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
ECA240G3008 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA240G4019 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA240G4766 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA246G0033 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA246G1170 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
ECA247G0962 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 98 39.8
ECA247G3288 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-09 67.0 98 39.8
SHI28980 Sapria himalayana HOM05D000002 ORTHO05D001544 1.1e-09 67.0 82 46.3
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 66.2 96 41.7
ECA238G0105 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 66.2 98 38.8
ECA236G0744 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-09 65.9 98 39.8
ECA238G1432 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-09 65.9 98 38.8
SHI34110 Sapria himalayana HOM05D000002 ORTHO05D001544 2.3e-09 65.9 82 40.2
THA.LOC104803408 Tarenaya hassleriana HOM05D000002 ORTHO05D001544 2.3e-09 65.9 108 38.0
SHI17186 Sapria himalayana HOM05D000002 ORTHO05D001544 3.1e-09 65.5 73 50.7
SHI54622 Sapria himalayana HOM05D008076 ORTHO05D001544 3.1e-09 65.5 78 41.0
SHI54932 Sapria himalayana HOM05D008076 ORTHO05D001544 3.1e-09 65.5 78 41.0
ECA232G1246 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.0e-09 65.1 94 40.4
SHI06256 Sapria himalayana HOM05D000002 ORTHO05D001544 4.0e-09 65.1 88 46.6
ECA248G3129 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-09 64.7 84 40.5
SHI01212 Sapria himalayana HOM05D000002 ORTHO05D001544 5.2e-09 64.7 83 44.6
SHI21983 Sapria himalayana HOM05D000002 ORTHO05D001544 5.2e-09 64.7 52 57.7
SHI29857 Sapria himalayana HOM05D000002 ORTHO05D001544 5.2e-09 64.7 73 45.2
HanXRQChr11g0327471 Helianthus annuus HOM05D000002 ORTHO05D000001 6.8e-09 64.3 106 39.6
ECA153G0009 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-09 63.9 78 41.0
ECA232G4367 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.9e-09 63.9 78 41.0
ECA233G5948 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.9e-09 63.9 78 41.0
ECA234G0947 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.9e-09 63.9 78 41.0
ECA240G1289 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-09 63.9 78 41.0
ECA246G3924 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.9e-09 63.9 98 38.8
Manes.05G117018 Manihot esculenta HOM05D000002 ORTHO05D001544 8.9e-09 63.9 85 44.7
HanXRQChr03g0088901 Helianthus annuus HOM05D000002 ORTHO05D001544 1.2e-08 63.5 106 39.6
HanXRQChr04g0115101 Helianthus annuus HOM05D000002 ORTHO05D001544 1.2e-08 63.5 106 39.6
SHI16214 Sapria himalayana HOM05D000002 ORTHO05D001544 1.2e-08 63.5 71 42.3
ECA238G1847 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.5e-08 63.2 98 40.8
ECA246G0086 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-08 62.8 110 39.1
PGR031G1340 Punica granatum HOM05D000002 ORTHO05D001544 2.0e-08 62.8 82 45.1
SHI01208 Sapria himalayana HOM05D000002 ORTHO05D001544 2.0e-08 62.8 52 61.5
SHI19447 Sapria himalayana HOM05D000002 ORTHO05D001544 2.0e-08 62.8 52 57.7
THA.LOC104825396 Tarenaya hassleriana HOM05D000002 ORTHO05D001544 2.0e-08 62.8 90 44.4
SHI19703 Sapria himalayana HOM05D000002 ORTHO05D001544 2.6e-08 62.4 73 41.1
SHI17184 Sapria himalayana HOM05D000002 ORTHO05D001544 4.4e-08 61.6 67 41.8
HanXRQChr08g0224631 Helianthus annuus HOM05D000002 ORTHO05D001544 5.8e-08 61.2 101 40.6
SHI07408 Sapria himalayana HOM05D000002 ORTHO05D001544 5.8e-08 61.2 73 45.2
SHI07469 Sapria himalayana HOM05D000002 ORTHO05D001544 5.8e-08 61.2 62 46.8
SHI14797 Sapria himalayana HOM05D000105 ORTHO05D001544 7.5e-08 60.8 90 45.6
ECA234G4687 Erigeron canadensis HOM05D000002 ORTHO05D001544 9.9e-08 60.5 103 37.9
Manes.18G144104 Manihot esculenta HOM05D000002 ORTHO05D001544 9.9e-08 60.5 85 42.4
SHI26748 Sapria himalayana HOM05D000002 ORTHO05D001544 1.3e-07 60.1 84 44.0
SHI32562 Sapria himalayana HOM05D008076 ORTHO05D001544 1.3e-07 60.1 77 35.1
SHI32603 Sapria himalayana HOM05D000002 ORTHO05D001544 1.3e-07 60.1 62 46.8
ECA240G4607 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 59.7 98 35.7
SHI19695 Sapria himalayana HOM05D000002 ORTHO05D001544 1.7e-07 59.7 52 53.8
SHI24155 Sapria himalayana HOM05D000002 ORTHO05D001544 1.7e-07 59.7 72 51.4
ECA248G2339 Erigeron canadensis HOM05D000002 ORTHO05D001544 2.9e-07 58.9 83 37.3
Manes.18G141045 Manihot esculenta HOM05D000002 ORTHO05D001544 2.9e-07 58.9 59 47.5
SHI21799 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-07 58.9 73 42.5
SHI34112 Sapria himalayana HOM05D008076 ORTHO05D001544 2.9e-07 58.9 89 37.1
SHI35727 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-07 58.9 92 44.6
SHI46719 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-07 58.9 92 44.6
SHI22864 Sapria himalayana HOM05D000002 ORTHO05D001544 3.7e-07 58.5 52 50.0
Manes.17G026082 Manihot esculenta HOM05D000002 ORTHO05D001544 4.9e-07 58.2 85 42.4
Ciclev10033628m.g Citrus clementina HOM05D000002 ORTHO05D001544 6.4e-07 57.8 90 41.1
Manes.01G061550 Manihot esculenta HOM05D000002 ORTHO05D001544 6.4e-07 57.8 76 44.7
Ciclev10006890m.g Citrus clementina HOM05D000002 ORTHO05D001544 8.3e-07 57.4 90 41.1
ECA232G1132 Erigeron canadensis HOM05D000002 ORTHO05D001544 8.3e-07 57.4 68 44.1
SHI20036 Sapria himalayana HOM05D023715 ORTHO05D001544 8.3e-07 57.4 99 36.4
SHI54430 Sapria himalayana HOM05D023715 ORTHO05D001544 8.3e-07 57.4 99 36.4
SHI54536 Sapria himalayana HOM05D023715 ORTHO05D001544 8.3e-07 57.4 99 36.4
SHI54901 Sapria himalayana HOM05D023715 ORTHO05D001544 8.3e-07 57.4 99 36.4
SHI55179 Sapria himalayana HOM05D023715 ORTHO05D001544 8.3e-07 57.4 99 36.4
Ciclev10003434m.g Citrus clementina HOM05D000002 ORTHO05D001544 1.1e-06 57.0 90 41.1
SHI15270 Sapria himalayana HOM05D008076 ORTHO05D001544 1.1e-06 57.0 59 47.5
SHI20081 Sapria himalayana HOM05D000002 ORTHO05D001544 1.4e-06 56.6 50 54.0
SHI46174 Sapria himalayana HOM05D000002 ORTHO05D001544 1.4e-06 56.6 52 50.0
THA.LOC104824954 Tarenaya hassleriana HOM05D000002 ORTHO05D001544 1.4e-06 56.6 59 44.1
ECA233G0399 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 99 37.4
PGR042G1292 Punica granatum HOM05D000002 ORTHO05D001544 1.9e-06 56.2 80 43.8
SHI06490 Sapria himalayana HOM05D000002 ORTHO05D001544 1.9e-06 56.2 84 41.7
SHI17392 Sapria himalayana HOM05D000002 ORTHO05D001544 2.4e-06 55.8 74 45.9
SHI38815 Sapria himalayana HOM05D000002 ORTHO05D001544 2.4e-06 55.8 52 50.0
Gorai.007G234500 Gossypium raimondii HOM05D000002 ORTHO05D001544 3.2e-06 55.5 51 49.0
ECA232G3296 Erigeron canadensis HOM05D002659 ORTHO05D002940 4.1e-06 55.1 108 36.1
ECA233G0223 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.1e-06 55.1 109 37.6
ECA238G3767 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.1e-06 55.1 110 33.6
THA.LOC104807100 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 4.1e-06 55.1 69 39.1
ECA234G4265 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-06 54.7 111 36.9
Gorai.010G113500 Gossypium raimondii HOM05D000002 ORTHO05D001544 5.4e-06 54.7 79 36.7
ECA246G1506 Erigeron canadensis HOM05D000002 ORTHO05D001544 7.1e-06 54.3 79 38.0
ECA247G4001 Erigeron canadensis HOM05D000002 ORTHO05D001544 7.1e-06 54.3 98 38.8
Manes.18G122902 Manihot esculenta HOM05D000002 ORTHO05D001544 7.1e-06 54.3 83 39.8
SHI52650 Sapria himalayana HOM05D008076 ORTHO05D001544 7.1e-06 54.3 78 39.7
ECA234G2236 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 53.9 90 35.6
ECA240G2086 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 53.9 115 33.9
ECA246G4153 Erigeron canadensis HOM05D000002 ORTHO05D001544 9.2e-06 53.9 97 37.1
SHI04500 Sapria himalayana HOM05D000002 ORTHO05D001544 9.2e-06 53.9 45 55.6
SHI08811 Sapria himalayana HOM05D000002 ORTHO05D001544 9.2e-06 53.9 68 47.1


User provided reference genes

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