Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 3.3e-89 331.6 165 100.0
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 9.8e-57 223.8 164 71.3
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 4.9e-56 221.5 163 72.4
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 1.2e-54 216.9 167 72.5
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 3.9e-53 211.8 152 73.0
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 8.6e-53 210.7 161 68.3
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.1e-52 210.3 163 67.5
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 1.1e-52 210.3 148 73.0
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.5e-52 209.9 153 73.2
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.5e-52 209.9 153 73.2
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.9e-52 209.5 153 74.5
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 4.3e-52 208.4 153 73.2
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 5.6e-52 208.0 162 68.5
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 1.6e-51 206.5 172 65.7
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-51 206.5 153 72.5
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 2.8e-51 205.7 163 66.9
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 3.6e-51 205.3 174 67.8
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 8.1e-51 204.1 165 68.5
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.4e-50 203.4 159 67.3
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 2.3e-50 202.6 162 66.7
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 6.8e-50 201.1 162 67.9
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.2e-49 200.3 166 67.5
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.5e-49 199.9 162 65.4
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 2.0e-49 199.5 164 65.9
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 5.8e-49 198.0 162 66.0
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 5.8e-49 198.0 154 69.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 7.5e-49 197.6 146 68.5
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 9.8e-49 197.2 154 69.5
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.3e-48 196.8 171 63.7
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.3e-48 196.8 135 73.3
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.3e-48 196.8 156 67.9
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 2.9e-48 195.7 142 70.4
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 3.7e-48 195.3 107 87.9
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 4.9e-48 194.9 150 66.7
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 6.4e-48 194.5 146 68.5
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 6.4e-48 194.5 150 67.3
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 1.1e-47 193.7 159 65.4
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 1.4e-47 193.4 126 76.2
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.4e-47 193.4 141 68.8
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 1.4e-47 193.4 150 70.0
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 1.4e-47 193.4 132 73.5
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.4e-47 193.4 152 67.8
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 2.4e-47 192.6 166 64.5
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 4.1e-47 191.8 126 75.4
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 4.1e-47 191.8 150 66.0
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 5.4e-47 191.4 119 79.8
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 7.1e-47 191.0 100 89.0
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 7.1e-47 191.0 100 89.0
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 7.1e-47 191.0 152 66.4
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 7.1e-47 191.0 152 66.4
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 9.2e-47 190.7 95 92.6
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 1.2e-46 190.3 126 76.2
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.6e-46 189.9 164 65.2
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 2.1e-46 189.5 126 75.4
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 2.1e-46 189.5 99 88.9
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 2.7e-46 189.1 152 65.1
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 3.5e-46 188.7 157 66.2
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 3.5e-46 188.7 126 74.6
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.7e-45 186.4 153 67.3
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.7e-45 186.4 94 88.3
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 3.0e-45 185.7 132 73.5
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 5.1e-45 184.9 97 87.6
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 5.1e-45 184.9 155 65.8
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 6.6e-45 184.5 150 67.3
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 6.6e-45 184.5 150 67.3
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.5e-44 183.3 140 68.6
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.5e-44 183.3 123 72.4
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.5e-44 182.6 123 72.4
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 9.5e-44 180.6 92 87.0
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 1.2e-43 180.3 160 60.0
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 2.1e-43 179.5 136 69.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 2.8e-43 179.1 92 85.9
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 4.7e-43 178.3 149 63.1
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.1e-42 177.2 136 68.4
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.4e-42 176.8 120 73.3
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 4.0e-42 175.3 91 86.8
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 1.5e-41 173.3 102 80.4
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 5.8e-41 171.4 138 65.2
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 7.6e-41 171.0 86 88.4
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 9.9e-41 170.6 157 59.2
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.7e-40 169.9 133 62.4
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 4.9e-40 168.3 99 76.8
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.9e-39 166.4 125 69.6
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 2.4e-39 166.0 86 86.0
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 4.1e-39 165.2 83 91.6
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 7.1e-39 164.5 114 68.4
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 1.7e-37 159.8 152 58.6
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 1.7e-37 159.8 142 59.9
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 3.0e-37 159.1 81 88.9
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 3.3e-36 155.6 82 86.6
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.6e-35 153.3 144 58.3
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.4e-34 150.2 80 82.5
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 6.9e-34 147.9 87 73.6
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.5e-33 146.7 124 60.5
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 3.4e-33 145.6 75 84.0
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.3e-32 143.7 162 49.4
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 2.2e-32 142.9 77 83.1
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 8.4e-32 141.0 109 63.3
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 2.1e-30 136.3 95 72.6
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 5.1e-29 131.7 68 82.4
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 1.5e-28 130.2 88 69.3
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 2.3e-21 106.3 90 65.6
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 3.9e-21 105.5 103 60.2


User provided reference genes

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