Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G086134 Manihot esculenta HOM05D003192 ORTHO05D003596 1.3e-54 216.1 108 100.0
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 6.9e-35 150.6 81 90.1
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.7e-20 102.8 110 50.9
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.7e-20 102.8 108 51.9
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 4.1e-19 98.2 108 50.0
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 5.3e-19 97.8 108 50.9
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 1.2e-18 96.7 107 48.6
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 2.0e-18 95.9 107 54.2
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 1.3e-17 93.2 108 47.2
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 2.9e-17 92.0 107 46.7
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 3.8e-17 91.7 109 49.5
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 8.5e-17 90.5 109 46.8
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 1.1e-16 90.1 110 48.2
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 1.9e-16 89.4 108 46.3
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.9e-16 89.4 107 44.9
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 3.2e-16 88.6 109 45.0
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 5.5e-16 87.8 108 45.4
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 1.2e-15 86.7 108 45.4
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.8e-14 82.8 109 45.0
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 6.7e-14 80.9 107 44.9
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-13 80.1 101 43.6
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.1e-13 80.1 108 42.6
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 2.6e-13 79.0 110 42.7
Dinv36931 Davidia involucrata HOM05D003192 ORTHO05D003596 3.3e-13 78.6 108 40.7
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 4.4e-13 78.2 110 37.3
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 7.4e-13 77.4 108 41.7
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 7.4e-13 77.4 108 41.7
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 9.7e-13 77.0 107 42.1
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 8.2e-12 73.9 108 40.7
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 1.1e-11 73.6 105 41.9
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 1.8e-11 72.8 106 39.6
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.8e-11 72.8 95 43.2
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.8e-11 72.8 95 43.2
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 5.3e-11 71.2 106 38.7
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 1.6e-10 69.7 108 38.9
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 2.0e-10 69.3 107 32.7
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 7.7e-10 67.4 108 38.0
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 1.0e-09 67.0 107 36.4
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 2.9e-09 65.5 107 34.6
Lalb_Chr05g0228511 Lupinus albus HOM05D003192 ORTHO05D003596 2.9e-09 65.5 109 39.4
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 3.8e-09 65.1 107 33.6
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 6.5e-09 64.3 107 30.8
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 6.5e-09 64.3 107 36.4
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 1.5e-08 63.2 89 41.6
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.5e-08 62.4 107 36.4
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 2.5e-08 62.4 106 34.0
Medtr8g471150 Medicago truncatula HOM05D003192 ORTHO05D003596 4.2e-08 61.6 96 34.4
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 5.5e-08 61.2 107 36.4
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 9.4e-08 60.5 103 35.0
Lalb_Chr05g0216371 Lupinus albus HOM05D003192 ORTHO05D003596 9.4e-08 60.5 107 36.4
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 9.4e-08 60.5 107 36.4
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 9.4e-08 60.5 107 36.4
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla HOM05D003192 ORTHO05D003596 1.2e-07 60.1 106 38.7
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 2.1e-07 59.3 109 35.8
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 2.1e-07 59.3 108 37.0
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 4.7e-07 58.2 79 39.2
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 4.7e-07 58.2 109 31.2
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 6.1e-07 57.8 110 30.0
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 6.1e-07 57.8 108 36.1
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 1.0e-06 57.0 105 37.1
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 1.0e-06 57.0 107 35.5
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 1.8e-06 56.2 107 36.4
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 2.3e-06 55.8 108 35.2
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 3.0e-06 55.5 92 32.6
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 3.0e-06 55.5 108 38.9
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 3.0e-06 55.5 108 36.1
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 4.0e-06 55.1 110 32.7
RcHm_v2.0_Chr6g0271001 Rosa chinensis HOM05D003192 ORTHO05D003596 4.0e-06 55.1 108 32.4
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 6.7e-06 54.3 104 32.7
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 6.7e-06 54.3 85 41.2
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 6.7e-06 54.3 113 31.0
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 8.8e-06 53.9 108 34.3


User provided reference genes

Program Settings