Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 5.7e-124 447.6 226 100.0
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 4.8e-78 295.0 239 68.2
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.4e-77 293.5 229 69.9
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 5.3e-77 291.6 239 64.9
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 1.5e-76 290.0 220 69.5
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 2.0e-76 289.7 240 66.2
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 2.6e-76 289.3 231 67.1
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.9e-74 283.1 239 66.1
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 3.2e-74 282.3 210 72.9
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 5.4e-74 281.6 231 66.2
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 5.4e-74 281.6 232 67.2
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.2e-73 280.4 239 65.3
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.6e-73 280.0 234 64.5
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 2.1e-73 279.6 221 67.4
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 2.7e-73 279.3 236 65.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.6e-73 278.5 232 65.9
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 7.9e-73 277.7 229 66.8
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.3e-72 276.9 232 65.9
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.9e-72 275.4 241 64.7
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 2.5e-71 272.7 211 67.8
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 3.3e-71 272.3 245 63.3
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 3.3e-71 272.3 219 65.3
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.3e-71 272.3 234 65.8
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.3e-71 271.9 246 63.0
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 2.1e-70 269.6 229 65.1
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.8e-70 269.2 201 69.7
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.8e-70 269.2 235 62.6
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 3.6e-70 268.9 241 63.9
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 4.8e-70 268.5 226 65.5
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 4.8e-70 268.5 247 60.7
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 8.1e-70 267.7 236 63.6
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 8.1e-70 267.7 228 65.4
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.1e-69 267.3 243 62.6
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.1e-69 267.3 155 85.2
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 2.4e-69 266.2 232 62.9
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 3.1e-69 265.8 174 77.6
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 5.3e-69 265.0 235 63.4
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 5.3e-69 265.0 235 62.1
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 6.9e-69 264.6 213 67.1
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 6.9e-69 264.6 235 63.4
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 6.9e-69 264.6 232 62.9
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 9.0e-69 264.2 212 67.0
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 9.0e-69 264.2 201 69.2
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 1.5e-68 263.5 157 83.4
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 3.4e-68 262.3 230 65.2
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 3.4e-68 262.3 177 78.0
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.5e-68 261.9 226 65.0
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.2e-67 259.6 224 63.4
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 3.8e-67 258.8 155 81.3
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.4e-66 256.9 219 65.3
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.1e-66 254.6 289 54.3
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 1.2e-65 253.8 200 68.0
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 4.6e-65 251.9 233 61.4
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 6.0e-65 251.5 198 66.7
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 2.5e-63 246.1 196 67.3
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 3.3e-63 245.7 151 79.5
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 7.4e-63 244.6 218 63.8
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 6.2e-62 241.5 183 69.4
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 6.0e-57 224.9 155 70.3
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 7.9e-57 224.6 158 70.3
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 6.9e-53 211.5 156 64.7
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.1e-50 204.1 155 64.5
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 7.9e-49 198.0 227 51.5
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 7.7e-44 181.4 96 88.5
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 2.9e-43 179.5 189 51.3
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 4.8e-38 162.2 177 54.8
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 8.8e-32 141.4 89 76.4
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.5e-26 123.2 165 48.5
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 9.4e-26 121.3 102 60.8
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 4.4e-23 112.5 127 53.5
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 4.5e-20 102.4 135 39.3
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 4.7e-17 92.4 117 47.0
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.0e-16 91.3 117 46.2
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.8e-16 88.2 46 91.3
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 8.8e-16 88.2 97 52.6
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 7.5e-15 85.1 47 85.1
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 3.7e-14 82.8 58 70.7
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 4.8e-14 82.4 47 83.0
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.1e-13 78.2 97 49.5
Potri.007G105401 Populus trichocarpa HOM05D007927 ORTHO05D010029 2.0e-12 77.0 106 44.3
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 4.4e-07 59.3 93 32.3
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 7.5e-07 58.5 92 33.7
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.7e-06 56.2 117 34.2
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 3.7e-06 56.2 94 31.9
MCO04G075 Micromonas commoda HOM05D016594 ORTHO05D018380 6.3e-06 55.5 97 35.1


User provided reference genes

Program Settings