Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 2.6e-81 305.4 170 100.0
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 3.2e-71 271.9 164 95.1
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 2.1e-62 242.7 164 81.1
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 3.0e-61 238.8 163 80.4
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 1.1e-58 230.3 163 79.1
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 3.1e-58 228.8 162 77.2
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 4.5e-57 224.9 162 77.2
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 4.5e-57 224.9 162 76.5
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 5.9e-57 224.6 162 77.2
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 5.9e-57 224.6 164 77.4
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 1.7e-56 223.0 162 75.9
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 5.0e-56 221.5 162 75.3
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 8.6e-56 220.7 162 75.9
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.5e-55 219.9 164 75.6
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.4e-53 213.4 162 75.9
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 2.9e-51 205.7 155 73.5
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 2.9e-51 205.7 149 76.5
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 6.4e-51 204.5 168 70.8
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.4e-50 202.6 153 75.2
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 2.4e-50 202.6 167 70.1
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 2.4e-50 202.6 167 70.1
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 2.0e-49 199.5 172 67.4
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 7.8e-49 197.6 163 70.6
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 7.8e-49 197.6 170 68.8
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 1.3e-48 196.8 164 72.6
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.1e-47 193.7 171 67.8
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 1.5e-47 193.4 180 66.1
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 2.5e-47 192.6 170 69.4
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 7.3e-47 191.0 170 68.2
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 9.5e-47 190.7 172 64.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 2.1e-46 189.5 170 68.2
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 1.8e-45 186.4 163 74.2
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 3.1e-45 185.7 149 72.5
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 4.0e-45 185.3 160 70.6
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.5e-44 183.3 171 65.5
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.4e-44 182.2 159 67.9
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 7.5e-44 181.0 172 64.0
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 7.5e-44 181.0 168 63.7
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 9.8e-44 180.6 172 63.4
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 8.3e-43 177.6 163 66.9
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 4.1e-42 175.3 166 65.1
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 5.4e-42 174.9 170 65.3
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.0e-41 172.9 165 65.5
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 2.7e-41 172.6 165 66.7
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 2.7e-41 172.6 165 66.1
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 7.8e-41 171.0 165 66.1
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 2.3e-40 169.5 165 66.1
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 8.6e-40 167.5 170 60.6
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 3.3e-39 165.6 169 63.9
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.8e-38 162.5 151 62.3
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 2.8e-38 162.5 122 74.6
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 4.7e-38 161.8 165 63.6
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.1e-37 160.6 171 60.8
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 1.4e-37 160.2 166 63.3
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.8e-37 159.8 165 64.2
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.1e-37 159.1 165 63.0
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 4.0e-37 158.7 165 61.8
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 5.2e-37 158.3 124 72.6
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 6.8e-37 157.9 135 67.4
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.5e-36 156.8 150 66.0
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 3.4e-36 155.6 165 61.8
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 4.4e-36 155.2 158 65.8
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 7.5e-36 154.5 174 55.2
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 9.8e-36 154.1 160 58.1
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 1.3e-35 153.7 172 57.0
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.7e-35 153.3 165 61.2
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 2.2e-35 152.9 136 66.9
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 2.9e-35 152.5 121 71.1
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 3.7e-35 152.1 172 58.1
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 6.4e-35 151.4 122 69.7
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 6.4e-35 151.4 165 61.2
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 8.3e-35 151.0 121 70.2
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 8.3e-35 151.0 121 70.2
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 8.3e-35 151.0 137 65.0
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 1.1e-34 150.6 150 66.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.9e-34 149.8 121 69.4
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 4.1e-34 148.7 135 65.2
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 5.4e-34 148.3 164 57.9
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 7.1e-34 147.9 165 58.2
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 9.2e-34 147.5 158 63.3
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.2e-33 147.1 125 67.2
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.6e-33 146.7 146 64.4
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 1.6e-33 146.7 161 55.3
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.6e-33 145.2 126 67.5
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 6.0e-33 144.8 149 62.4
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 7.8e-33 144.4 157 59.9
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 7.8e-33 144.4 165 58.2
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 7.8e-33 144.4 165 55.8
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 7.8e-33 144.4 197 49.7
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 7.8e-33 144.4 125 67.2
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 1.7e-32 143.3 165 58.8
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 3.9e-32 142.1 92 82.6
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 6.6e-32 141.4 157 59.2
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 6.6e-32 141.4 158 58.2
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 5.6e-31 138.3 181 52.5
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 5.6e-31 138.3 162 56.2
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 7.3e-31 137.9 150 60.0
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 9.5e-31 137.5 163 61.3
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.1e-30 136.3 142 60.6
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 2.8e-30 136.0 153 56.9
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 6.2e-30 134.8 161 54.0
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.1e-29 134.0 148 58.8
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.1e-29 134.0 135 65.2
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 2.3e-29 132.9 158 54.4
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 6.8e-29 131.3 162 53.1
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 6.8e-29 131.3 162 53.1
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 6.8e-29 131.3 162 53.1
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 8.9e-29 131.0 157 54.8
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 3.4e-28 129.0 117 64.1
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 7.6e-28 127.9 165 49.7
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 7.6e-28 127.9 165 49.7
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 1.3e-27 127.1 91 73.6
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 1.4e-26 123.6 149 54.4
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 1.4e-26 123.6 149 54.4
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 1.4e-26 123.6 92 75.0
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 3.2e-26 122.5 134 54.5
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 4.1e-26 122.1 91 71.4
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 1.6e-25 120.2 161 52.8
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 6.0e-25 118.2 79 79.7
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 7.8e-25 117.9 128 58.6
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 1.3e-24 117.1 122 60.7
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 9.6e-23 110.9 131 53.4
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 1.6e-22 110.2 87 72.4
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 1.4e-21 107.1 135 52.6
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.8e-21 106.7 88 72.7
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.8e-21 106.7 148 52.0
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 8.9e-21 104.4 146 52.7
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 1.3e-19 100.5 162 45.7
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.1e-18 97.4 84 69.0
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 9.3e-18 94.4 119 51.3
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 2.7e-17 92.8 172 41.3
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 6.0e-17 91.7 92 58.7
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 7.8e-17 91.3 176 43.8
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 7.3e-15 84.7 57 77.2
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 2.2e-11 73.2 141 45.4
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 3.8e-11 72.4 133 42.9
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 8.4e-11 71.2 132 46.2
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 1.6e-09 67.0 149 40.9
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.8e-08 63.5 64 60.9
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.5e-07 60.5 91 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 1.6e-06 57.0 150 40.7
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 2.1e-06 56.6 56 57.1


User provided reference genes

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