Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 5.6e-56 221.1 146 100.0
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 2.9e-44 182.2 146 80.1
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.3e-17 92.8 142 56.3
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.3e-17 92.8 142 48.6
Sabra06G0020700 Salix brachista HOM05D005060 ORTHO05D005975 2.8e-15 85.9 109 64.2
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 5.9e-13 78.2 130 46.2
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 7.7e-13 77.8 156 48.1
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 1.0e-12 77.4 124 55.6
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 1.7e-12 76.6 148 47.3
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.9e-11 73.2 123 41.5
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.5e-11 72.8 140 42.1
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 2.5e-11 72.8 157 50.3
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 1.2e-10 70.5 123 44.7
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.2e-10 70.5 140 43.6
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 2.7e-10 69.3 150 50.7
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 3.6e-10 68.9 130 50.0
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 4.7e-10 68.6 151 50.3
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 4.7e-10 68.6 131 40.5
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 6.1e-10 68.2 153 45.1
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 6.1e-10 68.2 152 42.1
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 8.0e-10 67.8 134 50.7
Potri.006G028101 Populus trichocarpa HOM05D005060 ORTHO05D005975 8.0e-10 67.8 93 57.0
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 8.0e-10 67.8 150 48.0
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 2.3e-09 66.2 117 46.2
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 6.7e-09 64.7 151 51.7
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 8.8e-09 64.3 124 46.8
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 2.0e-08 63.2 150 40.7
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.0e-08 63.2 148 52.7
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 2.0e-08 63.2 150 50.0
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 2.6e-08 62.8 125 52.8
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 3.3e-08 62.4 128 53.1
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 3.3e-08 62.4 128 53.1
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 4.4e-08 62.0 149 38.9
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 4.4e-08 62.0 138 45.7
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 7.5e-08 61.2 141 46.1
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 9.7e-08 60.8 120 45.0
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 4.8e-07 58.5 148 34.5
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 6.3e-07 58.2 145 39.3
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 8.2e-07 57.8 132 35.6
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 8.2e-07 57.8 145 37.9
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 1.1e-06 57.4 119 45.4
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 1.1e-06 57.4 152 46.7
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 1.4e-06 57.0 121 53.7
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 1.8e-06 56.6 125 32.8
EL10Ac3g07347 Beta vulgaris HOM05D005060 ORTHO05D005975 2.4e-06 56.2 89 56.2
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 2.4e-06 56.2 111 51.4
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 3.1e-06 55.8 150 46.0
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 3.1e-06 55.8 130 46.2
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 3.1e-06 55.8 139 41.0
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.1e-06 55.8 139 41.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 3.1e-06 55.8 152 39.5
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.1e-06 55.8 153 41.2
CiPaw.09G163900 Carya illinoinensis HOM05D005060 ORTHO05D005975 4.1e-06 55.5 110 35.5
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 4.1e-06 55.5 129 41.1
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.1e-06 55.5 145 41.4
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 4.1e-06 55.5 145 41.4
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 9.1e-06 54.3 147 34.7


User provided reference genes

Program Settings