Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G068800 Manihot esculenta HOM05D005385 ORTHO05D006768 1.6e-132 476.1 237 100.0
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 2.9e-94 349.0 239 74.9
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 1.0e-67 260.8 241 58.9
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 2.3e-67 259.6 241 58.9
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 2.0e-66 256.5 239 54.8
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 1.3e-65 253.8 239 55.2
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 2.8e-65 252.7 222 56.8
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 2.8e-65 252.7 238 54.6
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 3.7e-65 252.3 239 53.6
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.4e-64 250.4 229 56.8
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 9.1e-64 247.7 237 56.5
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.6e-63 246.9 239 54.8
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 3.5e-63 245.7 239 53.6
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 1.0e-62 244.2 241 53.1
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 2.2e-62 243.0 240 53.3
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 5.5e-61 238.4 241 51.5
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 8.0e-60 234.6 239 52.7
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 1.0e-59 234.2 235 51.9
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.3e-57 227.3 239 49.8
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 2.2e-57 226.5 239 48.5
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 6.3e-57 224.9 231 51.9
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 1.8e-56 223.4 236 50.0
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 4.1e-56 222.2 235 51.9
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 7.0e-56 221.5 242 51.2
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 5.9e-55 218.4 231 49.8
Nn8g40525 Nelumbo nucifera HOM05D005385 ORTHO05D006768 1.0e-54 217.6 239 46.0
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 1.3e-54 217.2 242 50.4
MD17G1100500 Malus domestica HOM05D005385 ORTHO05D006768 1.3e-54 217.2 234 49.6
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 3.8e-54 215.7 238 47.5
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 5.0e-54 215.3 242 49.6
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 8.6e-54 214.5 238 48.7
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 3.3e-53 212.6 241 49.0
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 9.5e-53 211.1 245 49.0
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 1.2e-52 210.7 241 49.4
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 1.6e-52 210.3 235 49.8
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 2.8e-52 209.5 191 52.9
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea HOM05D005385 ORTHO05D006768 3.6e-52 209.1 243 50.2
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea HOM05D005385 ORTHO05D006768 1.0e-51 207.6 243 49.4
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 1.4e-51 207.2 241 49.4
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 3.0e-51 206.1 242 47.5
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 5.2e-51 205.3 238 47.1
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 1.2e-50 204.1 246 47.2
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 1.5e-50 203.8 241 48.5
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 9.8e-50 201.1 218 46.3
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 9.8e-50 201.1 221 48.0
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 1.3e-49 200.7 251 42.6
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 1.7e-49 200.3 243 47.3
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.1e-48 197.6 217 47.9
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 1.8e-48 196.8 192 51.6
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 4.1e-48 195.7 241 44.8
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 4.1e-48 195.7 241 44.8
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 5.4e-48 195.3 241 44.8
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 2.0e-47 193.4 192 51.0
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 3.5e-47 192.6 238 47.5
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 1.0e-46 191.0 246 44.7
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 1.7e-46 190.3 240 42.9
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 2.3e-46 189.9 225 50.7
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 3.9e-46 189.1 239 41.8
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 1.5e-45 187.2 218 45.9
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 2.5e-45 186.4 224 44.2
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 3.3e-45 186.0 192 50.0
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 4.3e-45 185.7 240 47.9
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 7.3e-45 184.9 192 49.5
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 6.1e-44 181.8 242 47.5
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 1.2e-42 177.6 235 42.1
THA.LOC104801549 Tarenaya hassleriana HOM05D005385 ORTHO05D006768 7.5e-42 174.9 245 42.4
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 9.8e-42 174.5 225 48.4
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 3.7e-41 172.6 201 43.3
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 6.4e-41 171.8 245 40.4
Sp1g03960 Schrenkiella parvula HOM05D005385 ORTHO05D006768 1.9e-40 170.2 241 42.7
MD17G1100200 Malus domestica HOM05D005385 ORTHO05D006768 2.4e-40 169.9 190 48.9
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 7.0e-40 168.3 242 44.2
Aa31LG1G19650 Aethionema arabicum HOM05D005385 ORTHO05D006768 2.7e-39 166.4 222 43.2
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 4.6e-39 165.6 241 40.2
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 1.3e-38 164.1 241 39.8
A08p36580 Brassica napus HOM05D005385 ORTHO05D006768 1.7e-38 163.7 229 42.4
Thhalv10006711m.g Eutrema salsugineum HOM05D005385 ORTHO05D006768 3.9e-38 162.5 233 41.2
BraA08t35560Z Brassica rapa HOM05D005385 ORTHO05D006768 3.3e-37 159.5 229 41.9
AT1G05087 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 4.3e-37 159.1 236 42.8
Carub.0001s0438 Capsella rubella HOM05D005385 ORTHO05D006768 4.3e-37 159.1 236 40.3
HanXRQChr16g0506711 Helianthus annuus HOM05D005385 ORTHO05D006768 5.6e-37 158.7 240 38.8
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 7.3e-37 158.3 232 42.2
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 1.2e-36 157.5 239 38.9
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 1.2e-36 157.5 240 38.8
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 1.1e-35 154.5 222 38.7
BcaC05g24419 Brassica carinata HOM05D005385 ORTHO05D006768 2.3e-35 153.3 237 40.1
CARHR004550 Cardamine hirsuta HOM05D005385 ORTHO05D006768 3.1e-35 152.9 221 41.6
BolC5t29109H Brassica oleracea HOM05D005385 ORTHO05D006768 2.0e-34 150.2 237 39.7
BcaC07g36864 Brassica carinata HOM05D005385 ORTHO05D006768 2.6e-34 149.8 229 40.2
C08p01740 Brassica napus HOM05D005385 ORTHO05D006768 2.6e-34 149.8 229 40.2
BolC8t46974H Brassica oleracea HOM05D005385 ORTHO05D006768 2.6e-34 149.8 229 40.2
C05p03280 Brassica napus HOM05D005385 ORTHO05D006768 5.8e-34 148.7 218 41.7
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 1.7e-33 147.1 233 38.2
A10p03600 Brassica napus HOM05D005385 ORTHO05D006768 2.2e-33 146.7 217 41.9
BraA10t42636Z Brassica rapa HOM05D005385 ORTHO05D006768 2.9e-33 146.4 217 41.9
Gohir.D07G088200 Gossypium hirsutum HOM05D005385 ORTHO05D006768 6.4e-33 145.2 206 44.2
Gorai.001G094400 Gossypium raimondii HOM05D005385 ORTHO05D006768 6.4e-33 145.2 206 44.2
Gohir.A07G081700 Gossypium hirsutum HOM05D005385 ORTHO05D006768 1.1e-32 144.4 206 44.2
BcaB02g06881 Brassica carinata HOM05D005385 ORTHO05D006768 1.9e-32 143.7 218 40.8
AUR62043283 Chenopodium quinoa HOM05D005385 ORTHO05D006768 4.1e-32 142.5 239 39.3
EL10Ac6g14187 Beta vulgaris HOM05D005385 ORTHO05D006768 5.4e-32 142.1 239 37.7
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 1.6e-31 140.6 239 37.7
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 3.5e-31 139.4 231 36.8
SGA_v2.0_scaffold49G18342 Striga asiatica HOM05D005385 ORTHO05D006768 5.1e-30 135.6 228 36.8
Sc06g0009590 Simmondsia chinensis HOM05D005385 ORTHO05D006768 1.1e-29 134.4 147 46.3
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 1.2e-28 131.0 230 38.7
Ah.03g136860 Amaranthus hybridus HOM05D005385 ORTHO05D006768 2.1e-28 130.2 241 35.7
VMungo0251G1899 Vigna mungo HOM05D005385 ORTHO05D006768 3.6e-28 129.4 110 55.5
unitig_52.g17609 Utricularia gibba HOM05D005385 ORTHO05D006768 3.7e-25 119.4 187 36.4
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 1.4e-24 117.5 233 33.5
CDE02G3131 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 6.6e-22 108.6 191 37.2
CDE05G0211 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 9.6e-21 104.8 241 33.6
ECA236G2918 Erigeron canadensis HOM05D005385 ORTHO05D006768 2.8e-20 103.2 195 34.9
Lj1P773T39 Lonicera japonica HOM05D005385 ORTHO05D006768 1.4e-19 100.9 107 48.6
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 3.2e-16 89.7 147 42.9
Lj3P615T7 Lonicera japonica HOM05D005385 ORTHO05D006768 3.3e-13 79.7 106 42.5
HPP92_018560 Vanilla planifolia HOM05D005385 ORTHO05D006768 1.6e-12 77.4 95 41.1
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 5.3e-11 72.4 204 33.8
Nitab4.5_0000130g0270 Nicotiana tabacum HOM05D005385 ORTHO05D006768 2.9e-09 66.6 112 39.3
HPP92_018527 Vanilla planifolia HOM05D005385 ORTHO05D006768 7.9e-07 58.5 91 36.3
Rhsim06G0164700 Rhododendron simsii HOM05D005385 ORTHO05D006768 3.0e-06 56.6 96 43.8
RhsimUnG0010700 Rhododendron simsii HOM05D005385 ORTHO05D006768 3.0e-06 56.6 96 43.8


User provided reference genes

Program Settings