Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G068154 Manihot esculenta HOM05D016702 ORTHO05D000001 1.2e-76 289.7 139 100.0
Manes.10G109626 Manihot esculenta HOM05D016702 ORTHO05D000001 2.8e-36 155.6 135 55.6
Manes.15G175912 Manihot esculenta HOM05D016702 ORTHO05D000001 1.4e-24 116.7 133 45.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-18 96.7 163 34.4
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.1e-16 87.8 165 33.3
COL.COLO4_21367 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.0e-14 82.4 93 48.4
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.9e-14 82.0 162 30.2
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.1e-14 81.6 164 32.3
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.1e-14 81.6 164 32.3
Eucgr.F02352 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.9e-13 79.7 128 37.5
Ca_27382_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.3e-13 78.6 127 35.4
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 5.6e-13 78.2 97 39.2
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-13 78.2 166 27.7
Manes.12G065476 Manihot esculenta HOM05D016702 ORTHO05D000001 9.6e-13 77.4 92 42.4
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 2.8e-12 75.9 168 28.0
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 8.1e-12 74.3 154 29.9
Sabra19G0015700 Salix brachista HOM05D000002 ORTHO05D000001 8.1e-12 74.3 97 43.3
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.1e-11 73.9 149 32.9
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-11 73.2 166 30.7
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-11 73.2 167 32.3
COL.COLO4_28232 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.4e-11 72.8 108 37.0
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-11 72.8 165 31.5
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-11 72.0 158 34.2
Hma1.2p1_0179F.1_g079390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-11 71.6 102 38.2
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.3e-11 71.6 162 32.7
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 9.0e-11 70.9 165 30.3
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-11 70.9 81 44.4
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.0e-11 70.9 166 30.1
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-10 70.5 165 29.1
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-10 70.5 119 37.0
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-10 70.1 97 37.1
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-10 70.1 173 30.1
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-10 70.1 164 28.0
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-10 69.7 166 29.5
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.6e-10 69.3 163 27.6
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 4.4e-10 68.6 173 31.8
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 4.4e-10 68.6 169 29.0
Manes.05G129701 Manihot esculenta HOM05D016702 ORTHO05D000001 7.6e-10 67.8 89 40.4
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.6e-10 67.8 151 30.5
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.9e-10 67.4 96 36.5
Sabra16G0074100 Salix brachista HOM05D000002 ORTHO05D000001 9.9e-10 67.4 92 40.2
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-10 67.4 169 30.8
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.3e-09 67.0 135 29.6
Atru.chr13.2624 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-09 66.6 112 31.2
COL.COLO4_38494 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.7e-09 66.6 78 41.0
Eucgr.H01979 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.7e-09 66.6 70 48.6
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-09 66.6 141 29.1
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 2.9e-09 65.9 99 34.3
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 2.9e-09 65.9 164 29.9
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-09 65.5 163 28.8
CiPaw.11G011400 Carya illinoinensis HOM05D000148 ORTHO05D000081 4.9e-09 65.1 94 37.2
Hma1.2p1_0717F.1_g208250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-09 65.1 81 45.7
Sopen02g012310 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-09 65.1 98 40.8
Hma1.2p1_2472F.1_g322770 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-09 64.7 90 42.2
Manes.02G212860 Manihot esculenta HOM05D016702 ORTHO05D000001 6.4e-09 64.7 133 30.8
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.4e-09 64.7 155 29.0
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 8.4e-09 64.3 169 27.2
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.4e-09 64.3 93 37.6
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 180 27.8
Atru.chr7.437 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-08 63.5 107 35.5
Hma1.2p1_0079F.1_g041870 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-08 63.5 108 38.0
RcHm_v2.0_Chr2g0136201 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-08 63.5 94 33.0
Migut.O00008 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.9e-08 63.2 107 37.4
Manes.01G066175 Manihot esculenta HOM05D016702 ORTHO05D000001 1.9e-08 63.2 53 54.7
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-08 63.2 170 28.2
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 1.9e-08 63.2 168 25.6
Manes.05G146201 Manihot esculenta HOM05D016702 ORTHO05D000001 2.4e-08 62.8 133 32.3
Nn2g15978 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-08 62.8 93 40.9
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-08 62.8 166 25.3
Prupe.8G080900 Prunus persica HOM05D000002 ORTHO05D000001 2.4e-08 62.8 130 27.7
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 3.2e-08 62.4 163 28.2
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-08 62.4 169 29.6
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 3.2e-08 62.4 165 27.9
Manes.18G125450 Manihot esculenta HOM05D000002 ORTHO05D000001 5.4e-08 61.6 103 35.0
Migut.J01234 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.1e-08 61.2 97 38.1
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 7.1e-08 61.2 162 27.2
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 7.1e-08 61.2 166 27.7
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 9.3e-08 60.8 171 26.3
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-07 60.1 156 29.5
Thecc.10G161800 Theobroma cacao HOM05D031435 ORTHO05D000001 1.6e-07 60.1 75 40.0
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 2.1e-07 59.7 108 31.5
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-07 59.7 153 28.8
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 59.7 169 27.2
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-07 59.3 169 26.0
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-07 59.3 101 33.7
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-07 59.3 146 30.1
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 2.7e-07 59.3 87 34.5
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 2.7e-07 59.3 105 31.4
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 2.7e-07 59.3 160 28.1
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-07 58.9 168 26.8
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.6e-07 58.5 112 33.9
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 4.6e-07 58.5 164 26.8
Sabra15G0130700 Salix brachista HOM05D000432 ORTHO05D000001 4.6e-07 58.5 160 28.1
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 4.6e-07 58.5 156 28.2
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-07 58.5 169 29.0
Atru.chr3.2493 Acer truncatum HOM05D000002 ORTHO05D000001 6.0e-07 58.2 68 42.6
HanXRQChr08g0213321 Helianthus annuus HOM05D000002 ORTHO05D000001 6.0e-07 58.2 90 37.8
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-07 58.2 156 27.6
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 6.0e-07 58.2 158 27.8
RcHm_v2.0_Chr7g0203981 Rosa chinensis HOM05D000002 ORTHO05D000001 6.0e-07 58.2 105 31.4
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-07 58.2 166 28.9
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-07 58.2 167 26.9
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 141 29.1
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 155 27.7
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.9e-07 57.8 105 33.3
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 7.9e-07 57.8 128 27.3
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 7.9e-07 57.8 92 34.8
Prupe.8G185000 Prunus persica HOM05D000002 ORTHO05D000001 1.0e-06 57.4 177 27.1
ECA238G4116 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.0 172 27.3
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-06 57.0 101 32.7
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-06 57.0 174 25.9
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 83 39.8
Nitab4.5_0000498g0210 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.7e-06 56.6 158 25.3
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 56.6 159 26.4
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-06 56.2 91 33.0
CAN.G352.76 Capsicum annuum HOM05D000002 ORTHO05D000001 3.0e-06 55.8 83 36.1
ECA234G4404 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 88 37.5
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 3.0e-06 55.8 147 27.2
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 55.5 163 29.4
Hma1.2p1_0172F.1_g076200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.9e-06 55.5 97 30.9
Prupe.2G201300 Prunus persica HOM05D000010 ORTHO05D000001 3.9e-06 55.5 122 33.6
Manes.06G036650 Manihot esculenta HOM05D000002 ORTHO05D000001 5.1e-06 55.1 83 34.9
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 54.7 147 29.3
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 6.6e-06 54.7 156 28.2
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 6.6e-06 54.7 118 29.7
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 6.6e-06 54.7 158 25.9
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 101 33.7
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 8.7e-06 54.3 159 26.4


User provided reference genes

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