Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 1.5e-136 489.6 253 100.0
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 1.8e-134 482.6 253 98.8
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 5.1e-105 384.8 256 78.5
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 2.4e-102 375.9 253 76.3
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 4.5e-101 371.7 255 76.1
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 7.6e-101 370.9 254 73.6
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 1.3e-100 370.2 247 75.7
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 9.3e-99 364.0 253 71.9
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.7e-98 362.5 253 71.5
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 3.9e-97 358.6 253 70.8
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 4.3e-96 355.1 256 72.3
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 5.3e-94 348.2 264 68.6
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 2.0e-93 346.3 257 69.3
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 3.4e-93 345.5 254 70.9
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 5.9e-93 344.7 259 71.0
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 1.4e-91 340.1 251 72.5
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.9e-91 339.7 258 69.4
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 3.2e-91 339.0 254 69.3
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 4.2e-91 338.6 253 66.4
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 9.3e-91 337.4 253 68.8
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.2e-90 337.0 256 69.5
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 6.1e-90 334.7 257 67.7
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.3e-89 333.6 256 69.1
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 3.9e-89 332.0 256 69.1
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 5.1e-89 331.6 259 66.0
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 8.7e-89 330.9 276 64.5
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 1.1e-88 330.5 256 68.8
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 1.9e-88 329.7 252 67.5
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.9e-88 329.7 258 65.9
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 2.5e-88 329.3 256 66.0
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 3.3e-88 328.9 254 68.5
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 9.7e-88 327.4 252 67.9
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.3e-87 327.0 253 67.6
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 2.2e-87 326.2 255 65.1
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 2.8e-87 325.9 254 66.5
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 3.7e-87 325.5 254 67.3
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.1e-86 323.9 250 67.2
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.4e-86 323.6 255 64.7
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 1.8e-86 323.2 258 65.5
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 1.8e-86 323.2 264 64.0
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 4.1e-86 322.0 254 64.6
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 5.3e-86 321.6 255 65.5
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 1.3e-84 317.0 258 63.6
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 3.8e-84 315.5 258 64.0
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 3.8e-84 315.5 254 65.4
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 3.8e-84 315.5 259 63.3
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.1e-83 313.9 255 65.1
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 1.4e-83 313.5 255 62.7
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 4.2e-83 312.0 252 63.9
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 4.2e-83 312.0 283 60.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 5.5e-83 311.6 253 64.0
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 2.7e-82 309.3 252 63.1
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 3.6e-82 308.9 258 62.4
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 7.9e-82 307.8 252 62.7
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.4e-81 307.0 259 63.7
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 1.8e-81 306.6 254 64.6
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 5.1e-81 305.1 259 61.8
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 6.7e-81 304.7 253 63.6
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 8.8e-81 304.3 255 62.4
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.1e-80 303.9 254 63.8
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 7.4e-80 301.2 267 61.0
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 2.2e-79 299.7 265 58.9
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 3.7e-79 298.9 258 61.2
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 6.3e-79 298.1 277 58.1
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 6.3e-79 298.1 254 62.6
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 8.2e-79 297.7 259 59.5
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.1e-78 297.4 261 62.8
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 1.4e-78 297.0 265 60.4
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 1.8e-78 296.6 251 59.4
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 6.9e-78 294.7 258 60.5
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 9.1e-78 294.3 255 62.4
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 9.1e-78 294.3 257 62.6
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 2.0e-77 293.1 277 57.0
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 5.9e-77 291.6 213 67.1
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.0e-76 290.8 256 60.2
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 3.8e-76 288.9 250 60.8
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 8.5e-76 287.7 256 59.8
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 8.5e-76 287.7 258 60.9
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 1.1e-75 287.3 263 58.6
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 5.5e-75 285.0 246 61.8
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 7.2e-75 284.6 253 59.7
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.2e-74 283.9 267 57.3
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.5e-72 276.9 250 58.0
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 7.0e-70 268.1 253 54.9
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 7.0e-70 268.1 258 58.1
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.6e-69 266.9 215 68.4
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 2.0e-69 266.5 300 50.3
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 2.6e-69 266.2 259 56.4
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 2.7e-66 256.1 252 54.8
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.1e-66 255.0 256 59.4
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 6.1e-66 255.0 251 53.4
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 5.2e-65 251.9 261 53.3
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 5.3e-62 241.9 259 52.5
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 9.1e-62 241.1 259 51.4
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 7.2e-59 231.5 193 64.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 2.1e-58 229.9 157 73.9
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 2.0e-56 223.4 245 48.2
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.8e-49 200.3 163 60.1
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 3.5e-45 186.0 243 45.3
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.5e-40 170.6 171 55.0
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 8.3e-31 138.3 247 38.5
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 4.1e-30 136.0 238 38.2
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 2.0e-29 133.7 146 54.1
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 2.4e-22 110.2 125 54.4
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.6e-18 97.4 92 51.1
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 3.6e-18 96.3 64 65.6
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.7e-12 77.4 220 30.5
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.3e-12 77.0 220 30.9
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 1.5e-08 64.3 134 36.6
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 1.1e-06 58.2 43 60.5
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.4e-06 57.8 108 37.0


User provided reference genes

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