Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 6.0e-97 357.5 173 100.0
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 3.3e-63 245.4 173 67.1
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 2.6e-60 235.7 168 70.2
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 4.5e-60 235.0 172 64.0
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.9e-58 229.6 168 66.7
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.9e-58 229.6 168 66.1
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 3.2e-58 228.8 168 67.9
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 4.2e-58 228.4 167 64.1
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 5.5e-58 228.0 168 64.9
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 9.3e-58 227.3 168 66.1
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 1.2e-57 226.9 168 66.1
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 3.5e-57 225.3 168 65.5
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 4.6e-57 224.9 170 62.9
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 4.6e-57 224.9 171 63.7
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.3e-56 223.4 169 66.3
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.8e-56 223.0 169 63.9
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.8e-56 223.0 173 63.6
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.8e-56 223.0 171 62.0
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.3e-56 222.6 171 63.2
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 3.0e-56 222.2 158 67.1
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 3.0e-56 222.2 170 67.1
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 5.1e-56 221.5 169 62.7
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 6.7e-56 221.1 171 64.9
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 8.7e-56 220.7 168 63.1
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.1e-55 220.3 170 61.8
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.5e-55 219.9 163 65.6
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.5e-55 219.9 168 61.3
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.9e-55 219.5 168 64.3
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.9e-55 219.5 172 62.2
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 3.3e-55 218.8 148 70.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 7.4e-55 217.6 167 65.3
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 9.6e-55 217.2 170 62.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.6e-54 216.5 141 71.6
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 8.2e-54 214.2 169 60.9
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 8.2e-54 214.2 169 60.4
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.4e-53 213.4 171 60.2
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.8e-53 213.0 167 61.7
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 3.1e-53 212.2 174 58.6
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 9.0e-53 210.7 170 59.4
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 9.0e-53 210.7 168 62.5
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.4e-52 208.8 141 66.7
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 7.6e-52 207.6 172 58.7
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 5.0e-51 204.9 168 59.5
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 6.5e-51 204.5 168 57.7
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 8.4e-51 204.1 129 73.6
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.1e-50 203.8 168 60.1
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.9e-50 203.0 168 59.5
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.9e-50 203.0 168 59.5
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.9e-50 203.0 158 62.7
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.2e-50 201.8 166 57.8
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 5.5e-50 201.4 172 58.1
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 5.5e-50 201.4 141 67.4
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 9.3e-50 200.7 167 58.1
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 9.3e-50 200.7 139 64.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.2e-49 200.3 140 65.7
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 2.1e-49 199.5 142 64.1
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 2.1e-49 199.5 168 57.7
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.1e-49 199.5 166 56.6
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.1e-49 199.5 176 58.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 2.7e-49 199.1 172 58.1
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 3.5e-49 198.7 168 57.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 3.5e-49 198.7 174 59.8
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 7.9e-49 197.6 145 61.4
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.0e-48 197.2 171 59.1
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.3e-48 196.8 165 57.0
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 1.3e-48 196.8 169 54.4
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 3.9e-48 195.3 152 64.5
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 8.7e-48 194.1 148 60.1
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.1e-47 193.7 154 62.3
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.9e-47 193.0 169 55.6
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 2.5e-47 192.6 166 54.8
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 4.3e-47 191.8 152 61.8
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.2e-46 189.5 137 66.4
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 3.7e-46 188.7 169 56.2
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.1e-45 187.2 141 61.7
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-45 186.8 154 60.4
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 2.6e-44 182.6 127 67.7
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.9e-44 181.4 168 52.4
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 1.0e-43 180.6 137 61.3
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.0e-43 180.6 166 53.6
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 2.2e-43 179.5 137 60.6
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.8e-43 178.7 167 50.9
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.5e-42 176.0 148 57.4
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.2e-42 175.6 132 66.7
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.2e-42 175.6 167 49.1
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.1e-41 172.9 165 48.5
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 8.2e-38 161.0 134 56.0
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.8e-37 159.8 137 55.5
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.5e-36 156.8 166 48.2
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.5e-36 156.8 117 59.8
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 5.0e-35 151.8 169 47.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.0e-32 144.1 108 65.7
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 3.0e-32 142.5 125 53.6
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.7e-30 136.7 151 47.7
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.8e-30 136.0 96 61.5
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.2e-27 126.3 107 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.3e-22 110.5 134 42.5
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 8.2e-22 107.8 96 55.2
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.4e-21 106.3 135 40.7
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 4.1e-21 105.5 101 47.5
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.4e-16 90.5 62 62.9
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 6.8e-16 88.2 72 59.7
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 4.8e-14 82.0 107 37.4
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.7e-09 66.2 110 38.2
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 6.1e-09 65.1 70 50.0


User provided reference genes

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