Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 7.9e-83 310.5 163 100.0
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 1.9e-73 279.3 163 89.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.9e-68 262.7 163 82.8
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.6e-67 258.5 163 82.8
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 3.6e-67 258.5 163 81.6
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 7.9e-67 257.3 162 82.1
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.0e-66 256.9 165 80.0
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 5.1e-66 254.6 161 80.1
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.1e-65 253.4 163 80.4
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.3e-65 251.5 164 78.7
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.3e-64 250.0 163 79.1
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 3.7e-64 248.4 163 79.1
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 3.7e-64 248.4 164 77.4
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 8.2e-64 247.3 163 77.3
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.4e-63 246.5 163 77.3
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.4e-63 246.5 163 77.9
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.8e-63 246.1 163 77.3
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 3.1e-63 245.4 165 75.8
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.5e-62 243.0 163 77.9
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.6e-62 242.3 163 76.1
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 7.7e-62 240.7 163 77.3
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.0e-61 240.4 164 76.2
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.3e-61 240.0 166 75.3
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.2e-61 239.2 167 77.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.2e-61 239.2 164 78.0
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.9e-61 238.8 163 75.5
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.8e-61 238.4 164 76.2
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 3.8e-61 238.4 163 74.2
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 3.8e-61 238.4 163 74.2
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 5.0e-61 238.0 163 74.8
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.0e-61 238.0 163 76.7
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 8.5e-61 237.3 163 74.8
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.4e-60 236.5 169 75.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.9e-60 236.1 159 77.4
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 4.2e-60 235.0 164 73.8
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 4.2e-60 235.0 157 76.4
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 4.2e-60 235.0 166 74.1
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.5e-60 234.6 166 74.7
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 5.5e-60 234.6 163 74.8
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 2.1e-59 232.6 163 73.6
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 2.7e-59 232.3 163 74.2
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 4.7e-59 231.5 165 75.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 6.1e-59 231.1 162 74.1
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 7.9e-59 230.7 160 72.5
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.0e-58 230.3 164 71.3
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.0e-58 230.3 157 74.5
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.0e-58 230.3 157 74.5
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.4e-58 229.9 155 72.9
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 1.4e-58 229.9 163 74.2
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-58 229.9 165 72.7
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-58 229.9 165 72.7
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.4e-58 229.9 163 73.0
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.4e-58 229.9 163 73.0
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 3.0e-58 228.8 157 73.9
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 3.0e-58 228.8 160 71.2
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 3.9e-58 228.4 164 75.6
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 5.1e-58 228.0 167 72.5
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 5.1e-58 228.0 160 70.0
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.1e-57 226.9 164 72.6
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.1e-57 226.9 161 71.4
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.1e-57 226.9 161 71.4
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 2.0e-57 226.1 163 71.8
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 2.6e-57 225.7 162 69.8
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.3e-57 225.3 161 72.0
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 3.3e-57 225.3 167 70.7
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 4.4e-57 224.9 163 68.1
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.7e-57 224.6 157 73.2
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 7.4e-57 224.2 166 69.3
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 9.7e-57 223.8 160 70.0
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.7e-56 223.0 157 72.0
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 2.2e-56 222.6 167 67.7
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.7e-56 221.9 157 71.3
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 4.8e-56 221.5 163 72.4
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.8e-56 221.5 160 70.6
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 6.3e-56 221.1 167 68.3
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 6.3e-56 221.1 166 72.3
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 8.2e-56 220.7 165 67.9
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.4e-55 219.9 163 68.7
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.4e-55 219.9 160 70.6
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 1.8e-55 219.5 160 70.0
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 1.8e-55 219.5 160 70.0
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 2.4e-55 219.2 164 68.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 3.1e-55 218.8 163 71.2
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 162 69.8
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 4.1e-55 218.4 164 70.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 7.0e-55 217.6 160 68.8
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 5.9e-54 214.5 160 66.9
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.0e-53 213.8 160 66.9
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.9e-53 212.2 163 69.3
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 6.5e-53 211.1 162 67.3
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 8.5e-53 210.7 147 75.5
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.1e-52 210.3 152 71.7
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.9e-52 209.5 163 69.3
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.9e-52 209.5 163 65.0
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 2.5e-52 209.1 153 70.6
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 3.2e-52 208.8 163 65.6
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 3.2e-52 208.8 163 69.3
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 3.2e-52 208.8 163 69.3
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 9.4e-52 207.2 161 65.8
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 2.1e-51 206.1 161 64.6
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 3.6e-51 205.3 134 71.6
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 1.4e-50 203.4 168 66.1
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 3.0e-50 202.2 151 70.9
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 8.8e-50 200.7 162 63.0
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 3.3e-49 198.7 160 63.1
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 5.7e-49 198.0 119 79.8
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 4.8e-48 194.9 118 73.7
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 4.1e-47 191.8 139 71.9
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.7e-40 169.9 151 61.6
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.2e-38 163.7 155 57.4
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.8e-34 149.8 159 48.4
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 2.2e-32 142.9 160 46.9
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 9.1e-31 137.5 84 81.0
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 1.7e-29 133.3 77 76.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 2.5e-28 129.4 108 64.8
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 6.8e-26 121.3 147 46.9
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 2.2e-24 116.3 90 64.4
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-23 114.0 90 63.3
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 1.2e-19 100.5 171 47.4
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 5.4e-15 85.1 70 61.4
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 1.6e-14 83.6 151 34.4
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 7.8e-14 81.3 54 68.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 3.0e-13 79.3 49 75.5
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.5e-12 77.0 121 36.4
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.3e-08 63.9 131 32.1


User provided reference genes

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