Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 2.0e-132 475.7 233 100.0
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 6.8e-104 380.9 232 80.6
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 9.8e-103 377.1 232 79.3
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 2.2e-94 349.4 231 74.5
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 3.9e-91 338.6 230 73.0
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 1.9e-90 336.3 232 72.8
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 3.3e-90 335.5 236 71.6
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 9.5e-90 334.0 232 71.6
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 9.5e-90 334.0 229 71.2
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 9.5e-90 334.0 233 68.7
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 1.2e-89 333.6 231 71.4
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.1e-89 332.8 231 71.9
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.1e-89 332.8 231 71.4
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.1e-89 332.8 231 71.4
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 4.7e-89 331.6 231 71.9
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 1.4e-88 330.1 227 72.7
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 4.0e-88 328.6 230 72.6
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 4.0e-88 328.6 239 69.9
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 2.6e-87 325.9 239 71.1
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.7e-86 323.2 233 70.0
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 3.7e-86 322.0 234 68.4
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.1e-85 320.5 233 69.5
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.4e-85 320.1 233 69.5
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 2.1e-84 316.2 239 69.5
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.7e-84 315.8 233 67.0
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.7e-84 315.8 233 67.0
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 6.0e-84 314.7 214 72.0
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.3e-83 313.5 227 70.5
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 3.0e-83 312.4 218 70.6
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 8.6e-83 310.8 231 66.7
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.1e-82 310.5 231 67.1
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 1.5e-82 310.1 232 66.8
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 1.9e-82 309.7 236 67.8
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 3.3e-82 308.9 214 72.0
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 9.5e-82 307.4 234 67.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 1.2e-81 307.0 239 66.1
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 1.6e-81 306.6 234 67.5
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 2.8e-81 305.8 227 67.4
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 3.6e-81 305.4 234 66.7
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 3.6e-81 305.4 234 66.7
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 8.1e-81 304.3 231 64.9
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.1e-80 303.9 235 66.0
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 1.1e-80 303.9 240 66.2
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.1e-80 302.4 228 67.1
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 3.1e-80 302.4 235 65.5
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 1.2e-79 300.4 223 66.8
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 1.2e-79 300.4 226 66.8
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 1.5e-79 300.1 234 64.5
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.4e-79 298.9 233 67.4
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 4.4e-79 298.5 243 62.6
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 7.6e-79 297.7 233 64.8
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 1.7e-78 296.6 239 64.4
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 3.8e-78 295.4 236 63.1
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.4e-77 293.5 231 64.1
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.4e-77 293.5 236 62.7
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 1.9e-77 293.1 216 69.0
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.9e-77 293.1 230 63.5
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 3.2e-77 292.4 248 60.9
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 1.2e-76 290.4 232 62.5
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 1.6e-76 290.0 226 64.6
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 1.6e-76 290.0 239 62.8
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 2.7e-76 289.3 216 66.2
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 1.3e-75 287.0 206 68.4
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 1.3e-75 287.0 210 68.6
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 1.9e-74 283.1 233 60.9
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 1.9e-74 283.1 237 62.0
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 4.3e-74 282.0 187 71.1
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 9.6e-74 280.8 230 63.0
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 3.6e-73 278.9 309 51.8
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 3.6e-73 278.9 237 61.2
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 1.1e-72 277.3 239 60.7
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 6.9e-72 274.6 198 68.2
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 7.6e-71 271.2 203 66.0
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 9.9e-71 270.8 268 53.7
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 9.9e-71 270.8 232 58.6
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 1.7e-70 270.0 203 65.5
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 8.4e-70 267.7 225 60.0
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.4e-69 266.9 195 68.7
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 1.9e-69 266.5 257 57.6
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 2.4e-69 266.2 214 63.1
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 4.6e-68 261.9 203 65.5
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 3.6e-65 252.3 215 62.8
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 8.1e-65 251.1 159 74.8
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 2.6e-63 246.1 152 79.6
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.6e-63 246.1 176 69.3
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 4.5e-63 245.4 159 74.8
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 7.6e-63 244.6 163 74.2
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 9.9e-63 244.2 215 59.1
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 2.4e-61 239.6 227 55.9
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 2.3e-59 233.0 159 74.2
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 7.4e-58 228.0 170 70.0
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 1.1e-56 224.2 139 76.3
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 1.5e-55 220.3 237 52.7
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 1.9e-53 213.4 163 66.9
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.7e-49 199.1 215 52.1
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 1.1e-40 171.0 108 73.1
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 4.5e-39 165.6 133 61.7
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 3.2e-37 159.5 129 59.7
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 3.4e-31 139.4 122 59.8
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 6.1e-28 128.6 107 63.6
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 1.4e-24 117.5 82 70.7
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.6e-20 104.0 77 66.2
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 1.6e-20 104.0 91 56.0
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 1.0e-19 101.3 86 60.5
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 1.3e-14 84.3 67 61.2
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 6.1e-12 75.5 68 54.4
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 2.8e-09 66.6 72 51.4
Potri.007G083100 Populus trichocarpa HOM05D007255 ORTHO05D009052 1.2e-07 61.2 36 77.8


User provided reference genes

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