Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.8e-65 252.3 115 100.0
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.8e-31 138.3 87 79.3
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.5e-27 126.3 83 71.1
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.9e-27 125.9 92 70.7
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.5e-27 125.6 80 73.8
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.3e-27 125.2 86 69.8
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.3e-27 124.8 87 70.1
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.4e-27 124.0 87 70.1
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.4e-27 124.0 92 69.6
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 9.6e-27 123.6 83 71.1
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 1.3e-26 123.2 91 67.0
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.3e-26 123.2 83 71.1
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-26 122.9 92 68.5
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-26 122.9 87 69.0
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 2.8e-26 122.1 88 69.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.8e-26 122.1 87 66.7
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 2.8e-26 122.1 87 73.6
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 3.7e-26 121.7 87 69.0
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 3.7e-26 121.7 71 74.6
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 4.8e-26 121.3 86 68.6
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 4.8e-26 121.3 86 72.1
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 4.8e-26 121.3 87 71.3
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 4.8e-26 121.3 53 96.2
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 8.2e-26 120.6 76 73.7
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 8.2e-26 120.6 87 69.0
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 8.2e-26 120.6 53 96.2
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 8.2e-26 120.6 118 52.5
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.1e-25 120.2 72 73.6
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 1.4e-25 119.8 88 67.0
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.8e-25 119.4 87 69.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.8e-25 119.4 53 96.2
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.4e-25 119.0 86 68.6
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.1e-25 118.6 86 68.6
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.1e-25 118.6 53 94.3
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.1e-25 118.2 88 70.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 5.3e-25 117.9 52 96.2
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 5.3e-25 117.9 88 69.3
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.3e-25 117.9 88 69.3
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 5.3e-25 117.9 79 68.4
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 6.9e-25 117.5 79 70.9
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 6.9e-25 117.5 85 67.1
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 6.9e-25 117.5 86 69.8
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 6.9e-25 117.5 72 76.4
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 6.9e-25 117.5 65 78.5
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 9.0e-25 117.1 66 78.8
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.2e-24 116.7 53 92.5
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-24 116.7 53 92.5
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.2e-24 116.7 52 94.2
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.0e-24 115.9 86 67.4
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.0e-24 115.9 88 69.3
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 2.6e-24 115.5 54 92.6
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 2.6e-24 115.5 53 90.6
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.6e-24 115.5 53 92.5
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.6e-24 115.5 69 75.4
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.4e-24 115.2 53 92.5
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.4e-24 115.2 88 67.0
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 3.4e-24 115.2 53 90.6
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 4.5e-24 114.8 57 84.2
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 4.5e-24 114.8 51 96.1
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 7.6e-24 114.0 86 68.6
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 7.6e-24 114.0 86 67.4
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.0e-23 113.6 53 90.6
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.3e-23 113.2 50 96.0
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.3e-23 113.2 52 92.3
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.7e-23 112.8 71 73.2
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.7e-23 112.8 89 65.2
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.7e-23 112.8 80 67.5
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 2.2e-23 112.5 84 60.7
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 2.9e-23 112.1 85 62.4
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 2.9e-23 112.1 52 90.4
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 2.9e-23 112.1 87 60.9
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.9e-23 112.1 83 65.1
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.9e-23 112.1 84 65.5
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 3.8e-23 111.7 53 84.9
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 3.8e-23 111.7 53 84.9
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.8e-23 111.7 53 88.7
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 5.0e-23 111.3 56 89.3
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 5.0e-23 111.3 64 71.9
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 5.0e-23 111.3 75 69.3
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 6.5e-23 110.9 72 69.4
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 6.5e-23 110.9 51 92.2
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 8.4e-23 110.5 87 60.9
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.1e-22 110.2 53 84.9
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 1.4e-22 109.8 55 89.1
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.4e-22 109.8 53 86.8
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.4e-22 109.8 82 59.8
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.9e-22 109.4 60 78.3
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.9e-22 109.4 60 78.3
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.9e-22 109.4 60 78.3
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.9e-22 109.4 67 74.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.5e-22 109.0 85 63.5
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 4.2e-22 108.2 50 90.0
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 2.7e-21 105.5 88 63.6
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 3.5e-21 105.1 51 80.4
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 2.3e-20 102.4 90 56.7
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.3e-20 102.4 93 54.8
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 3.0e-20 102.1 47 85.1
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 5.1e-20 101.3 52 78.8
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.1e-20 101.3 56 71.4
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 6.7e-20 100.9 51 78.4
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 8.7e-20 100.5 63 71.4
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.9e-19 99.4 54 74.1
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 3.3e-19 98.6 51 76.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.3e-18 96.7 56 80.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 1.6e-18 96.3 50 80.0
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.8e-17 92.8 55 70.9
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 4.1e-17 91.7 48 72.9
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 4.1e-17 91.7 53 71.7
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 9.0e-17 90.5 73 54.8
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 8.5e-15 84.0 49 63.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.2e-13 80.1 51 62.7


User provided reference genes

Program Settings