Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 1.7e-56 223.0 166 100.0
Potri.002G246900 Populus trichocarpa HOM05D008362 ORTHO05D010554 1.7e-16 90.1 81 67.9
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 4.2e-15 85.5 84 58.3
Sabra02G0188000 Salix brachista HOM05D008362 ORTHO05D010554 1.6e-14 83.6 85 60.0
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 1.3e-11 73.9 72 62.5
Atru.chr6.1443 Acer truncatum HOM05D008362 ORTHO05D010554 1.7e-11 73.6 82 61.0
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 1.7e-11 73.6 82 53.7
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 2.4e-10 69.7 63 61.9
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.2e-09 67.4 52 82.7
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 1.5e-09 67.0 75 54.7
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 3.4e-09 65.9 81 50.6
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 1.0e-08 64.3 75 65.3
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.3e-08 63.9 62 59.7
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 1.7e-08 63.5 81 55.6
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.7e-08 63.5 54 72.2
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 1.7e-08 63.5 62 71.0
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 2.2e-08 63.2 62 69.4
Thecc.01G217300 Theobroma cacao HOM05D008362 ORTHO05D010554 2.2e-08 63.2 68 58.8
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 1.4e-07 60.5 83 43.4
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 1.4e-07 60.5 70 52.9
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 1.9e-07 60.1 54 61.1
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 2.5e-07 59.7 74 47.3
Ciclev10024415m.g Citrus clementina HOM05D008362 ORTHO05D010554 2.5e-07 59.7 62 51.6
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 2.5e-07 59.7 32 87.5
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 2.5e-07 59.7 61 55.7
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 4.2e-07 58.9 76 40.8
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 5.5e-07 58.5 30 93.3
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 5.5e-07 58.5 45 71.1
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 5.5e-07 58.5 62 50.0
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.2e-06 57.4 43 65.1
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 1.6e-06 57.0 57 56.1
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 1.6e-06 57.0 33 81.8
TAR636G3018 Trochodendron aralioides HOM05D008362 ORTHO05D010554 1.6e-06 57.0 58 53.4
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 2.1e-06 56.6 67 47.8
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 2.7e-06 56.2 31 83.9
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 3.6e-06 55.8 112 34.8
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 7.9e-06 54.7 56 66.1
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 7.9e-06 54.7 31 80.6


User provided reference genes

Program Settings