Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 5.6e-217 757.3 372 100.0
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 6.2e-91 338.6 291 62.9
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 1.0e-85 321.2 283 62.5
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 1.5e-84 317.4 300 60.7
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 5.6e-84 315.5 288 59.0
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 3.6e-83 312.8 289 61.6
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 4.7e-83 312.4 272 61.8
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 4.7e-83 312.4 289 60.9
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 4.7e-83 312.4 404 47.0
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 1.1e-82 311.2 285 60.0
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 1.8e-82 310.5 289 61.2
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 4.0e-82 309.3 301 57.5
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 6.8e-82 308.5 285 58.9
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 1.2e-81 307.8 285 58.9
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 2.0e-81 307.0 311 56.3
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 5.8e-81 305.4 289 56.1
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 3.8e-80 302.8 276 59.8
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 3.2e-79 299.7 299 53.8
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.2e-78 297.7 271 58.7
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.6e-78 297.4 302 55.3
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 1.6e-78 297.4 292 54.5
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 3.5e-78 296.2 243 60.9
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 1.7e-77 293.9 283 56.2
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 8.6e-77 291.6 252 58.7
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 8.6e-77 291.6 271 57.6
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 1.1e-76 291.2 289 55.7
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 2.5e-76 290.0 240 61.7
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 3.3e-76 289.7 219 65.8
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 9.6e-76 288.1 252 57.9
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 2.1e-75 287.0 295 50.5
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 3.6e-75 286.2 246 59.3
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 4.7e-75 285.8 274 54.7
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 6.2e-75 285.4 291 55.0
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 5.2e-74 282.3 246 58.1
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 2.6e-73 280.0 292 53.1
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 3.4e-73 279.6 252 58.7
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 1.3e-72 277.7 273 58.2
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 2.2e-72 276.9 272 55.5
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 3.8e-72 276.2 289 54.0
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 1.9e-71 273.9 238 60.1
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.9e-71 273.9 230 61.7
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 4.2e-71 272.7 222 59.5
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 4.2e-71 272.7 240 56.2
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 5.4e-71 272.3 239 56.1
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 7.1e-71 271.9 287 55.4
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 1.6e-70 270.8 272 55.9
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 3.5e-70 269.6 286 52.4
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 2.3e-69 266.9 244 58.2
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 3.0e-69 266.5 234 56.0
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 5.6e-68 262.3 296 50.0
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 2.8e-67 260.0 240 58.8
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 1.1e-66 258.1 265 51.7
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 3.4e-65 253.1 227 58.6
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 1.1e-63 248.1 239 56.1
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 1.4e-63 247.7 198 60.1
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 1.9e-63 247.3 267 54.7
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 2.4e-63 246.9 236 55.1
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 1.2e-62 244.6 237 56.1
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 2.1e-62 243.8 237 55.3
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 2.7e-62 243.4 237 55.7
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 2.7e-62 243.4 237 55.7
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.5e-60 237.7 242 57.0
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 2.5e-60 236.9 276 51.4
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 1.3e-59 234.6 145 73.1
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.3e-59 234.6 222 55.0
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 3.7e-59 233.0 277 50.9
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.8e-58 230.7 285 49.5
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 2.4e-58 230.3 250 52.4
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 3.5e-54 216.5 246 50.8
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 3.5e-54 216.5 222 55.0
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 1.0e-53 214.9 222 52.3
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 1.9e-52 210.7 241 50.6
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 1.6e-51 207.6 120 79.2
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 1.6e-51 207.6 205 53.7
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 2.1e-51 207.2 122 78.7
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 4.8e-51 206.1 113 84.1
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 4.0e-50 203.0 141 70.2
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 5.0e-40 169.5 124 69.4
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 1.8e-37 161.0 216 42.6
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 1.0e-32 145.2 234 40.6
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 9.1e-18 95.5 123 48.8
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 3.2e-15 87.0 138 37.7


User provided reference genes

Program Settings