Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 8.7e-128 460.3 231 100.0
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.0e-63 246.5 233 57.1
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.2e-62 243.0 226 59.7
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.3e-59 233.8 226 54.4
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 6.2e-57 224.9 233 55.4
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 4.4e-55 218.8 233 52.4
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.3e-54 217.2 231 51.5
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 2.2e-54 216.5 222 52.7
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.9e-54 216.1 232 53.9
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 4.9e-54 215.3 229 52.0
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 9.2e-53 211.1 239 52.3
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.7e-52 209.5 206 57.8
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.3e-51 207.2 185 61.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 8.6e-51 204.5 224 48.7
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 7.3e-50 201.4 232 51.3
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 9.5e-50 201.1 226 51.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 1.8e-48 196.8 180 61.7
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 5.2e-48 195.3 237 51.9
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 5.2e-48 195.3 224 51.8
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 2.0e-47 193.4 235 47.7
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.0e-47 193.4 233 48.5
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.8e-47 191.8 228 48.7
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 2.9e-46 189.5 231 48.1
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.9e-46 189.5 227 45.8
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 3.8e-46 189.1 230 48.7
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 8.4e-46 188.0 284 42.6
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.9e-45 186.8 227 46.7
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 4.2e-45 185.7 212 50.9
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 9.2e-45 184.5 267 42.7
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 9.2e-45 184.5 222 49.1
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 9.2e-45 184.5 232 47.8
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.2e-44 184.1 219 49.3
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.2e-44 184.1 234 46.2
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.6e-44 183.7 237 47.7
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.6e-44 183.7 227 46.7
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 2.1e-44 183.3 244 47.1
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 4.6e-44 182.2 230 48.3
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.0e-44 181.8 229 45.9
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 6.0e-44 181.8 225 49.3
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.3e-43 180.6 224 46.4
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.7e-43 180.3 183 53.0
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 1.7e-43 180.3 229 46.3
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 5.1e-43 178.7 228 44.3
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 6.6e-43 178.3 231 48.1
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 1.5e-42 177.2 234 45.7
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.9e-42 176.8 241 43.2
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 2.5e-42 176.4 232 45.7
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 3.3e-42 176.0 234 47.0
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 3.3e-42 176.0 234 45.7
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 9.6e-42 174.5 231 44.2
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 1.6e-41 173.7 230 47.0
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.6e-41 173.7 180 52.8
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 1.6e-41 173.7 235 46.4
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 3.6e-41 172.6 240 43.8
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 4.7e-41 172.2 183 51.4
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.1e-40 171.0 234 46.6
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 5.3e-40 168.7 234 45.7
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 5.3e-40 168.7 238 45.4
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.2e-39 167.5 234 44.9
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.2e-39 167.5 227 45.4
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 2.6e-39 166.4 232 44.8
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 3.4e-39 166.0 231 42.4
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 7.6e-39 164.9 232 45.3
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.2e-38 163.3 222 45.0
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.2e-38 163.3 233 46.4
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 2.9e-38 162.9 209 48.8
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.9e-38 162.9 229 44.1
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 2.9e-38 162.9 244 42.2
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 3.8e-38 162.5 145 57.2
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 4.9e-38 162.2 207 41.1
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 8.4e-38 161.4 181 47.0
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.4e-37 160.6 233 44.2
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 7.1e-37 158.3 244 41.4
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 3.5e-36 156.0 226 43.4
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.7e-35 153.7 125 60.8
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.7e-35 153.7 209 46.4
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 2.3e-35 153.3 237 44.3
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 3.0e-35 152.9 234 44.4
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 3.3e-34 149.4 100 70.0
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 4.3e-34 149.1 104 71.2
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 9.6e-34 147.9 233 39.5
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.3e-33 147.5 92 76.1
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.1e-32 144.4 184 47.3
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.8e-32 143.7 231 39.8
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 2.4e-32 143.3 233 38.6
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.1e-29 134.4 185 48.1
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-29 132.5 101 62.4
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 1.8e-27 127.1 89 71.9
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.8e-27 127.1 184 40.8
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.1e-27 125.6 94 60.6
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.9e-26 123.6 222 35.6
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.9e-26 123.6 222 35.6
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 3.3e-26 122.9 163 46.6
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 4.3e-26 122.5 178 43.8
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.8e-25 119.8 112 56.2
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 5.8e-23 112.1 152 44.1
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.8e-19 100.5 78 62.8
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.6e-17 94.0 150 36.0
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.8e-16 90.5 188 35.1
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.0e-14 84.7 231 28.6
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.2e-13 79.7 98 45.9
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 1.6e-12 77.4 89 48.3
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.0e-11 74.7 90 45.6
CSS0037252 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.9e-10 70.5 144 31.2


User provided reference genes

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