Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 0.0e+00 1306.6 637 100.0
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 3.3e-92 343.6 643 37.9
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 5.2e-90 336.3 643 37.2
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 8.9e-90 335.5 643 37.2
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 5.8e-89 332.8 642 36.8
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 7.9e-78 295.8 688 34.9
QL09p043642 Quercus lobata HOM05D009210 ORTHO05D010367 1.4e-74 285.0 610 35.6
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 2.9e-64 250.8 704 31.7
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 5.3e-58 229.9 585 30.9
Thecc.01G245200 Theobroma cacao HOM05D009210 ORTHO05D010367 1.6e-54 218.4 568 32.6
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 1.5e-52 211.8 461 32.5
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 1.1e-50 205.7 783 26.7
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 2.2e-48 198.0 660 28.8
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 6.5e-48 196.4 783 26.2
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 4.6e-46 190.3 524 31.3
RcHm_v2.0_Chr6g0285611 Rosa chinensis HOM05D016859 ORTHO05D010367 6.1e-46 189.9 418 34.2
Dinv19248 Davidia involucrata HOM05D009210 ORTHO05D010367 3.0e-45 187.6 393 36.4
FAN15G1208 Fragaria x ananassa HOM05D016859 ORTHO05D010367 1.2e-41 175.6 445 33.3
FAN27G2643 Fragaria x ananassa HOM05D016859 ORTHO05D010367 3.8e-40 170.6 445 32.6
Haze_24738 Corylus avellana HOM05D009210 ORTHO05D010367 1.1e-39 169.1 285 36.5
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 1.4e-39 168.7 522 29.3
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 3.0e-37 161.0 632 26.6
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 2.8e-35 154.5 514 28.2
COL.COLO4_08165 Corchorus olitorius HOM05D009210 ORTHO05D010367 5.0e-32 143.7 678 26.3
CsaV3_7G025420 Cucumis sativus L. HOM05D026148 ORTHO05D010367 4.2e-31 140.6 521 30.5
MELO3C024146.2 Cucumis melo HOM05D026148 ORTHO05D010367 2.6e-28 131.3 524 29.8
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 3.3e-28 131.0 426 28.2
ClCG09G009440 Citrullus lanatus HOM05D026148 ORTHO05D010367 5.7e-28 130.2 591 29.3
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 2.4e-26 124.8 350 32.3
Atru.chr5.1922 Acer truncatum HOM05D009210 ORTHO05D010367 4.1e-26 124.0 444 27.5
CANSAT01G1047 Cannabis sativa HOM05D009210 ORTHO05D010367 1.0e-24 119.4 317 32.2
MSTRG.17532 Avicennia marina HOM05D013334 ORTHO05D015998 6.5e-24 116.7 503 29.0
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 3.2e-23 114.4 334 29.3
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 7.2e-23 113.2 247 37.7
Hund18342 Selenicereus undatus HOM05D017699 ORTHO05D019543 6.1e-22 110.2 263 32.3
CSS0048272 Camellia sinensis var. sinensis HOM05D009210 ORTHO05D010367 2.3e-21 108.2 480 25.6
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 6.8e-21 106.7 525 27.6
TPR.G25869 Trifolium pratense HOM05D014010 ORTHO05D010367 8.8e-21 106.3 234 37.6
Duzib133G1530 Durio zibethinus HOM05D009210 ORTHO05D010367 5.7e-20 103.6 247 35.2
CiPaw.04G192300 Carya illinoinensis HOM05D009210 ORTHO05D010367 4.8e-19 100.5 224 34.4
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 1.1e-18 99.4 220 37.7
Sed0006753 Sechium edule HOM05D026148 ORTHO05D010367 1.4e-18 99.0 203 37.4
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 1.6e-17 95.5 207 36.2
Nn3g19852 Nelumbo nucifera HOM05D009210 ORTHO05D010367 5.9e-17 93.6 315 29.5
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 7.7e-17 93.2 258 34.5
MD10G1171600 Malus domestica HOM05D016859 ORTHO05D010367 1.5e-15 89.0 166 37.3
Nitab4.5_0002330g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 2.5e-15 88.2 463 26.8
Atru.chr5.1921 Acer truncatum HOM05D009210 ORTHO05D010367 2.7e-14 84.7 160 41.2
Nitab4.5_0001557g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 6.1e-14 83.6 407 26.5
MBI10_g16802_MAGBIO Magnolia biondii HOM05D024193 ORTHO05D010367 4.0e-13 80.9 418 25.8
CAN.G771.49 Capsicum annuum HOM05D013334 ORTHO05D015998 5.2e-13 80.5 530 24.9
arahy.Tifrunner.gnm1.ann1.201IN6 Arachis hypogaea HOM05D014010 ORTHO05D010367 2.6e-12 78.2 339 27.7
SGA_v2.0_scaffold3G01596 Striga asiatica HOM05D009210 ORTHO05D015998 4.4e-12 77.4 234 31.2
Glyma.13G129600 Glycine max HOM05D014010 ORTHO05D010367 2.2e-11 75.1 216 33.3
Ah.08g213820 Amaranthus hybridus HOM05D017699 ORTHO05D019543 1.4e-10 72.4 226 29.6
SalBow6G1944 Salvia bowleyana HOM05D013334 ORTHO05D010367 1.8e-10 72.0 237 30.0
Sopen06g035070 Solanum pennellii HOM05D013334 ORTHO05D015998 1.8e-10 72.0 234 32.1
Aqoxy5G00051 Aquilegia oxysepala HOM05D024193 ORTHO05D010367 2.0e-09 68.6 190 33.7
PSO764G0241 Papaver somniferum HOM05D024193 ORTHO05D010367 1.7e-08 65.5 293 27.6
Phvul.007G155700 Phaseolus vulgaris HOM05D014010 ORTHO05D010367 6.6e-08 63.5 100 39.0
QL09p043548 Quercus lobata HOM05D002769 ORTHO05D010367 1.9e-07 62.0 119 34.5
ECA236G3347 Erigeron canadensis HOM05D040207 ORTHO05D010367 2.5e-07 61.6 171 31.6
VMungo0720G0709 Vigna mungo HOM05D014010 ORTHO05D010367 7.3e-07 60.1 191 31.9
HanXRQChr13g0408971 Helianthus annuus HOM05D040207 ORTHO05D010367 9.5e-07 59.7 280 27.5
EL10Ac7g17752 Beta vulgaris HOM05D017699 ORTHO05D019543 1.2e-06 59.3 196 30.1
GSVIVG01028482001 Vitis vinifera HOM05D009210 ORTHO05D010367 2.1e-06 58.5 59 61.0
Peaxi162Scf00517g00315 Petunia axillaris HOM05D013334 ORTHO05D015998 4.7e-06 57.4 235 32.3
THA.LOC104814711 Tarenaya hassleriana HOM05D012015 ORTHO05D014750 4.7e-06 57.4 188 30.3
Carub.0003s3458 Capsella rubella HOM05D012015 ORTHO05D014750 6.1e-06 57.0 227 28.2
AUR62025394 Chenopodium quinoa HOM05D017699 ORTHO05D019543 6.1e-06 57.0 225 28.0
DCAR_000542 Daucus carota HOM05D009210 ORTHO05D010367 6.1e-06 57.0 279 26.9
PGSC0003DMG400020082 Solanum tuberosum HOM05D013334 ORTHO05D015998 6.1e-06 57.0 168 29.8


User provided reference genes

Program Settings