Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G040700 Manihot esculenta HOM05D009253 ORTHO05D010845 3.3e-71 271.6 133 100.0
Manes.12G035800 Manihot esculenta HOM05D009253 ORTHO05D010845 5.3e-37 157.9 106 75.5
Cfa002472 Carpinus fangiana HOM05D009253 ORTHO05D010845 1.7e-19 99.8 87 57.5
Prupe.8G216600 Prunus persica HOM05D009253 ORTHO05D010845 1.2e-17 93.6 87 55.2
Potri.014G192100 Populus trichocarpa HOM05D009253 ORTHO05D010845 8.9e-16 87.4 88 51.1
Lj5g0016892 Lotus japonicus HOM05D009253 ORTHO05D010845 1.2e-15 87.0 91 46.2
Glyma.10G039800 Glycine max HOM05D009253 ORTHO05D010845 2.6e-15 85.9 96 43.8
CiPaw.03G269700 Carya illinoinensis HOM05D009253 ORTHO05D010845 1.3e-14 83.6 89 51.7
Glyma.13G126300 Glycine max HOM05D009253 ORTHO05D010845 6.3e-14 81.3 99 43.4
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 6.3e-14 81.3 93 43.0
TAR365G0673 Trochodendron aralioides HOM05D009253 ORTHO05D010845 1.1e-13 80.5 78 47.4
Phvul.007G190000 Phaseolus vulgaris HOM05D009253 ORTHO05D010845 1.4e-13 80.1 98 43.9
COL.COLO4_10585 Corchorus olitorius HOM05D009253 ORTHO05D010845 2.4e-13 79.3 87 42.5
FAN20G2031 Fragaria x ananassa HOM05D009253 ORTHO05D010845 9.2e-13 77.4 82 50.0
Gohir.D07G157500 Gossypium hirsutum HOM05D009253 ORTHO05D010845 1.2e-12 77.0 87 42.5
RcHm_v2.0_Chr6g0286891 Rosa chinensis HOM05D009253 ORTHO05D010845 1.6e-12 76.6 87 48.3
CiPaw.04G189600 Carya illinoinensis HOM05D009253 ORTHO05D010845 2.7e-12 75.9 88 45.5
Gohir.A07G150900 Gossypium hirsutum HOM05D009253 ORTHO05D010845 2.7e-12 75.9 87 42.5
Lalb_Chr06g0170671 Lupinus albus HOM05D009253 ORTHO05D010845 3.9e-11 72.0 83 42.2
CAN.G1395.1 Capsicum annuum HOM05D019196 ORTHO05D010845 8.6e-11 70.9 78 42.3
TAR362G0345 Trochodendron aralioides HOM05D009253 ORTHO05D010845 8.6e-11 70.9 100 43.0
Oeu052072.1 Olea europaea HOM05D019196 ORTHO05D010845 1.1e-10 70.5 77 44.2
TPR.G2669 Trifolium pratense HOM05D009253 ORTHO05D010845 3.3e-10 68.9 88 42.0
Sopen09g028650 Solanum pennellii HOM05D019196 ORTHO05D010845 5.6e-10 68.2 88 39.8
Glyma.03G166600 Glycine max HOM05D009253 ORTHO05D010845 7.3e-10 67.8 69 50.7
CARHR179290 Cardamine hirsuta HOM05D010454 ORTHO05D012601 2.1e-09 66.2 93 44.1
TPR.G31881 Trifolium pratense HOM05D009253 ORTHO05D010845 2.1e-09 66.2 67 46.3
Hma1.2p1_1112F.1_g258640 Hydrangea macrophylla HOM05D009253 ORTHO05D010845 2.8e-09 65.9 89 41.6
BcaC04g21878 Brassica carinata HOM05D010454 ORTHO05D012601 3.6e-09 65.5 92 39.1
C09p26250 Brassica napus HOM05D010454 ORTHO05D012601 3.6e-09 65.5 92 39.1
BolC9t55526H Brassica oleracea HOM05D010454 ORTHO05D012601 3.6e-09 65.5 92 39.1
Phvul.001G164100 Phaseolus vulgaris HOM05D009253 ORTHO05D010845 4.7e-09 65.1 85 41.2
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.4e-08 63.5 92 40.2
Gohir.D11G139000 Gossypium hirsutum HOM05D040896 ORTHO05D010845 1.8e-08 63.2 88 36.4
Lsat_1_v5_gn_5_183301 Lactuca sativa HOM05D009253 ORTHO05D010845 1.8e-08 63.2 79 39.2
Carub.0008s0454 Capsella rubella HOM05D010454 ORTHO05D012601 2.3e-08 62.8 90 37.8
AT5G44005 Arabidopsis thaliana HOM05D010454 ORTHO05D012601 3.1e-08 62.4 93 40.9
A09p20740 Brassica napus HOM05D010454 ORTHO05D012601 6.8e-08 61.2 95 36.8
BraA09t37678Z Brassica rapa HOM05D010454 ORTHO05D012601 6.8e-08 61.2 95 36.8
Gorai.007G149200 Gossypium raimondii HOM05D040896 ORTHO05D010845 6.8e-08 61.2 88 35.2
arahy.Tifrunner.gnm1.ann1.T032QQ Arachis hypogaea HOM05D005642 ORTHO05D010845 1.2e-07 60.5 76 46.1
Gohir.A11G132900 Gossypium hirsutum HOM05D040896 ORTHO05D010845 1.5e-07 60.1 88 35.2
THA.LOC109117257 Tarenaya hassleriana HOM05D010454 ORTHO05D012601 2.0e-07 59.7 84 38.1
Glyma.19G167700 Glycine max HOM05D009253 ORTHO05D010845 2.6e-07 59.3 67 47.8
AL8G16080 Arabidopsis lyrata HOM05D010454 ORTHO05D012601 3.4e-07 58.9 93 39.8
Nn1g02939 Nelumbo nucifera HOM05D019196 ORTHO05D010845 3.4e-07 58.9 65 50.8
BcaC03g16623 Brassica carinata HOM05D010454 ORTHO05D012601 7.5e-07 57.8 93 37.6
Sed0026815 Sechium edule HOM05D009253 ORTHO05D010845 7.5e-07 57.8 83 43.4
Thhalv10003297m.g Eutrema salsugineum HOM05D010454 ORTHO05D012601 1.3e-06 57.0 95 38.9
Medtr7g098280 Medicago truncatula HOM05D009253 ORTHO05D010845 1.3e-06 57.0 68 42.6
CsaV3_3G028270 Cucumis sativus L. HOM05D009253 ORTHO05D010845 2.2e-06 56.2 89 39.3
BcaB07g30546 Brassica carinata HOM05D010454 ORTHO05D012601 3.7e-06 55.5 91 37.4
CSS0049490 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 3.7e-06 55.5 88 38.6
Psat6g063040 Pisum sativum HOM05D009253 ORTHO05D010845 4.9e-06 55.1 77 40.3
Sabra02G0196000 Salix brachista HOM05D045422 ORTHO05D010845 8.3e-06 54.3 38 60.5
VMungo1383G1487 Vigna mungo HOM05D009253 ORTHO05D010845 8.3e-06 54.3 61 45.9


User provided reference genes

Program Settings