Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.1e-273 946.0 467 100.0
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 2.1e-176 622.9 474 67.1
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 8.4e-154 547.7 474 60.1
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 7.9e-152 541.2 473 58.8
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.5e-150 536.2 467 57.8
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 1.6e-149 533.5 468 57.1
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.8e-148 530.0 467 57.2
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 9.0e-148 527.7 481 56.5
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 4.2e-145 518.8 486 53.7
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 6.0e-144 515.0 487 55.2
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 1.8e-143 513.5 471 54.8
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 1.8e-143 513.5 471 55.8
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 1.9e-142 510.0 461 55.5
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 2.4e-140 503.1 461 56.2
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 2.6e-139 499.6 458 55.7
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 2.6e-139 499.6 446 58.1
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 3.4e-139 499.2 472 54.7
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 5.8e-139 498.4 470 54.5
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 1.0e-138 497.7 459 55.1
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 3.3e-134 482.6 498 52.0
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 4.5e-131 472.2 505 51.5
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 8.5e-130 468.0 443 54.6
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.2e-129 465.7 443 54.4
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.4e-127 460.7 474 53.4
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-122 444.1 423 54.8
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.4e-121 440.7 429 54.1
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 3.0e-119 433.0 457 48.8
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 1.5e-118 430.6 459 47.7
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 2.8e-117 426.4 461 50.3
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 3.6e-112 409.5 383 55.6
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 5.2e-111 405.6 383 55.4
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 9.7e-110 401.4 321 64.8
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 3.7e-109 399.4 461 46.2
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 6.3e-109 398.7 466 47.2
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 7.7e-107 391.7 443 46.0
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 5.2e-103 379.0 457 46.0
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 2.0e-102 377.1 456 43.9
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 7.5e-102 375.2 456 43.4
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.7e-101 374.0 467 45.6
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 2.4e-100 370.2 456 43.9
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 5.4e-100 369.0 440 44.8
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.0e-99 367.1 508 41.1
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 4.5e-99 365.9 464 41.8
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.3e-98 364.4 464 41.2
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 2.9e-98 363.2 454 42.7
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 1.9e-97 360.5 460 42.4
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 4.0e-95 352.8 454 41.6
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 8.8e-95 351.7 454 41.9
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 8.8e-95 351.7 454 41.9
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.2e-94 351.3 454 41.6
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 9.8e-94 348.2 439 41.0
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 3.7e-93 346.3 407 47.2
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 1.1e-89 334.7 457 41.8
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 7.5e-86 322.0 382 44.2
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 8.3e-85 318.5 478 37.9
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 2.7e-83 313.5 465 41.1
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.5e-81 307.8 448 38.4
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 5.6e-81 305.8 405 41.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 4.6e-75 286.2 456 36.8
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.0e-74 285.0 448 35.5
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 3.9e-74 283.1 467 36.4
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.6e-73 279.3 219 57.1
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 7.3e-73 278.9 403 39.2
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 1.2e-70 271.6 411 39.4
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 6.4e-69 265.8 395 38.2
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 1.4e-68 264.6 246 58.5
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 6.6e-66 255.8 472 33.7
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 9.5e-65 251.9 248 54.4
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 6.2e-64 249.2 459 34.0
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.9e-57 227.6 302 41.4
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.5e-54 218.0 239 51.5
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 5.8e-38 162.9 300 35.0
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.2e-35 155.2 239 37.2
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.8e-30 136.3 89 71.9
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.2e-27 128.6 161 46.0
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 1.1e-25 122.1 404 26.2
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 1.1e-17 95.5 260 26.5
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 1.5e-17 95.1 466 23.4
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 1.1e-15 89.0 55 65.5
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 5.3e-15 86.7 54 68.5
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 4.5e-14 83.6 448 20.8
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 2.1e-11 74.7 63 50.8


User provided reference genes

Program Settings