Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 2.9e-100 368.6 191 100.0
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.3e-36 157.1 192 52.6
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.2e-34 150.6 192 51.0
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 5.1e-33 145.2 193 50.8
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 5.1e-33 145.2 193 50.8
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 4.2e-27 125.6 199 47.2
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 2.1e-26 123.2 197 45.7
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 1.1e-24 117.5 193 43.0
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.1e-24 117.5 189 43.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.0e-24 116.7 196 44.4
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 2.6e-24 116.3 194 42.8
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 4.4e-24 115.5 203 41.9
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 9.7e-24 114.4 199 43.2
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 1.7e-23 113.6 180 47.2
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 4.8e-23 112.1 191 42.4
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.8e-22 110.2 194 43.8
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 3.1e-22 109.4 196 42.3
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 7.0e-22 108.2 187 42.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.1e-22 107.8 196 40.8
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 2.0e-21 106.7 196 41.3
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 5.9e-21 105.1 205 40.5
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.0e-20 104.4 196 43.4
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 1.3e-20 104.0 190 42.6
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 3.8e-20 102.4 200 43.5
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 3.8e-20 102.4 197 43.1
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 3.8e-20 102.4 197 43.1
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 3.8e-20 102.4 200 39.0
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 6.5e-20 101.7 188 41.5
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.5e-19 99.8 186 38.7
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 5.5e-19 98.6 185 42.7
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.4e-19 97.8 187 39.6
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.7e-18 96.3 186 38.7
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 4.7e-18 95.5 201 36.3
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 6.1e-18 95.1 196 39.3
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.0e-17 94.4 186 38.7
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.8e-17 93.6 201 39.8
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 5.2e-17 92.0 198 37.9
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 8.8e-17 91.3 197 37.6
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.6e-16 89.7 178 38.8
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.6e-16 89.7 208 37.0
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.3e-16 89.4 189 38.1
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 5.7e-16 88.6 180 37.2
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 2.8e-15 86.3 195 33.3
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 8.2e-15 84.7 201 35.8
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 3.1e-14 82.8 181 40.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 4.1e-14 82.4 111 45.0
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 4.1e-14 82.4 201 34.3
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 5.3e-14 82.0 192 35.4
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.7e-13 79.7 184 35.9
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 5.9e-13 78.6 189 34.4
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 1.7e-12 77.0 108 42.6
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 3.8e-12 75.9 203 33.0
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 6.5e-12 75.1 204 34.8
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 3.2e-11 72.8 158 35.4
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 3.2e-11 72.8 197 34.5
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 1.6e-10 70.5 172 34.9
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 3.6e-10 69.3 196 32.1
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 8.8e-09 64.7 215 27.9
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 2.6e-08 63.2 232 30.6
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 3.4e-08 62.8 184 35.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 3.4e-08 62.8 194 34.0
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 7.5e-08 61.6 47 63.8
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 1.3e-07 60.8 206 27.7
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.7e-07 60.5 180 32.2
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 3.7e-07 59.3 205 32.2
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.1e-06 57.8 196 24.5
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 1.8e-06 57.0 184 29.3
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 2.4e-06 56.6 181 26.5
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 3.1e-06 56.2 204 26.0
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 3.1e-06 56.2 190 30.0
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 4.1e-06 55.8 208 25.0
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 5.4e-06 55.5 191 33.5
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 5.4e-06 55.5 202 28.7
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 7.0e-06 55.1 217 27.2


User provided reference genes

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