Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.4e-184 649.4 329 100.0
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.1e-75 287.7 284 58.8
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.4e-75 287.3 262 59.5
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.8e-73 280.4 283 54.4
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.8e-73 280.4 292 51.7
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 1.9e-72 276.9 299 50.8
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 3.1e-70 269.6 289 54.0
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 5.3e-70 268.9 283 53.0
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 5.9e-69 265.4 283 51.2
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.3e-68 264.2 263 54.0
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 6.1e-66 255.4 281 50.2
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 3.9e-65 252.7 286 51.4
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 2.2e-63 246.9 320 48.8
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 5.9e-61 238.8 251 51.0
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 1.0e-60 238.0 286 51.4
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 1.3e-60 237.7 273 50.9
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 6.5e-60 235.3 285 49.8
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 7.4e-56 221.9 287 51.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.1e-54 218.0 307 43.6
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.1e-54 218.0 283 45.6
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 1.4e-54 217.6 285 47.7
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 4.1e-54 216.1 284 49.6
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 4.1e-54 216.1 287 47.0
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 7.0e-54 215.3 307 43.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 3.5e-53 213.0 284 46.1
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.5e-53 212.6 329 41.6
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.5e-53 212.6 329 41.6
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 4.5e-53 212.6 291 49.1
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 7.7e-53 211.8 285 47.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 5.5e-51 205.7 286 45.8
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 5.5e-51 205.7 312 43.6
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 9.4e-51 204.9 287 42.9
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.2e-50 204.5 284 47.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 1.6e-50 204.1 299 43.5
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 1.6e-50 204.1 292 45.9
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.7e-50 203.4 289 48.1
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 2.0e-48 197.2 289 46.0
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.0e-48 197.2 289 46.4
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 4.4e-48 196.1 276 42.8
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.8e-47 192.6 319 40.1
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 4.1e-46 189.5 309 38.5
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 4.1e-46 189.5 285 40.7
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 5.3e-46 189.1 320 37.8
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.0e-46 188.7 311 43.4
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.0e-44 182.6 335 37.0
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 8.5e-44 181.8 284 40.1
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 8.5e-44 181.8 280 41.1
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 7.2e-43 178.7 355 35.5
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.6e-42 177.6 289 42.9
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 1.6e-42 177.6 307 38.8
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 2.1e-42 177.2 297 39.7
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 2.7e-42 176.8 336 35.1
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 1.8e-41 174.1 257 41.2
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.0e-41 173.3 337 35.6
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 6.8e-41 172.2 283 40.6
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 8.8e-41 171.8 287 36.6
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.2e-40 171.4 255 43.1
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.6e-40 170.2 318 39.6
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 7.5e-40 168.7 290 42.1
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 9.1e-38 161.8 282 39.7
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 3.5e-37 159.8 298 37.2
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 4.5e-37 159.5 279 38.7
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-36 157.9 156 53.2
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 2.3e-36 157.1 222 43.7
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 8.6e-36 155.2 278 35.6
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 5.5e-35 152.5 287 38.7
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 5.5e-35 152.5 290 37.6
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 7.2e-35 152.1 338 35.5
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.7e-34 149.4 171 49.7
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 2.3e-33 147.1 289 36.7
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.9e-33 145.2 268 37.7
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.2e-32 144.8 301 34.6
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 2.6e-32 143.7 313 36.7
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 2.2e-31 140.6 358 33.5
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.8e-30 137.5 270 35.9
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 5.4e-30 136.0 122 57.4
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 2.0e-29 134.0 364 31.0
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 2.0e-29 134.0 262 35.1
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 2.7e-29 133.7 202 45.0
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.7e-29 133.7 290 33.1
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 1.7e-28 131.0 296 35.1
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 2.9e-28 130.2 403 29.3
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 1.1e-27 128.3 281 35.9
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 1.1e-27 128.3 285 34.4
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 4.3e-27 126.3 275 35.6
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 5.6e-27 125.9 281 35.6
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.8e-26 123.6 306 31.7
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 3.6e-26 123.2 175 42.9
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 8.0e-26 122.1 287 33.4
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 1.0e-25 121.7 217 35.0
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 4.0e-25 119.8 192 42.7
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 4.4e-24 116.3 89 67.4
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 9.8e-24 115.2 264 33.7
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 9.8e-24 115.2 292 33.2
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.9e-23 113.6 235 34.9
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 1.3e-20 104.8 153 47.7
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.3e-20 104.8 135 40.0
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.1e-19 101.7 235 34.5
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.5e-19 101.3 208 37.0
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 4.3e-19 99.8 207 36.2
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.6e-18 97.8 286 36.7
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.8e-18 97.1 136 43.4
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 1.7e-15 87.8 253 30.4
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 5.4e-14 82.8 112 43.8
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 4.6e-13 79.7 114 40.4
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 7.8e-13 79.0 332 29.5
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 6.6e-12 75.9 275 27.6
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 5.6e-11 72.8 111 39.6
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 2.0e-08 64.3 309 27.8
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 4.9e-07 59.7 149 33.6
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 5.4e-06 56.2 83 36.1


User provided reference genes

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