Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G024400 Manihot esculenta HOM05D002002 ORTHO05D003658 3.7e-114 414.8 205 100.0
Manes.12G023250 Manihot esculenta HOM05D002002 ORTHO05D003658 1.8e-76 289.7 207 72.0
Potri.008G186700 Populus trichocarpa HOM05D002002 ORTHO05D003658 4.5e-67 258.5 207 65.2
Potri.010G046225 Populus trichocarpa HOM05D002002 ORTHO05D003658 1.4e-65 253.4 207 62.8
Thecc.02G259800 Theobroma cacao HOM05D002002 ORTHO05D003658 3.7e-61 238.8 213 60.1
Ciclev10033784m.g Citrus clementina HOM05D002002 ORTHO05D003658 6.5e-58 228.0 207 58.5
Atru.chr11.2098 Acer truncatum HOM05D002002 ORTHO05D003658 7.9e-56 221.1 210 58.6
Gohir.D02G158850 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.0e-55 220.7 213 54.9
MD13G1101500 Malus domestica HOM05D002002 ORTHO05D003658 1.5e-54 216.9 189 60.3
Prupe.1G244300 Prunus persica HOM05D002002 ORTHO05D003658 4.8e-53 211.8 219 55.7
COL.COLO4_24276 Corchorus olitorius HOM05D002002 ORTHO05D008711 8.2e-53 211.1 215 52.1
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.4e-49 200.3 183 57.9
RcHm_v2.0_Chr4g0432961 Rosa chinensis HOM05D002002 ORTHO05D008711 1.9e-49 199.9 192 56.8
Actinidia15095 Actinidia chinensis HOM05D002002 ORTHO05D003658 2.3e-47 193.0 185 52.4
FAN05G0600 Fragaria x ananassa HOM05D002002 ORTHO05D003658 8.8e-47 191.0 217 51.2
FAN05G4965 Fragaria x ananassa HOM05D002002 ORTHO05D003658 8.8e-47 191.0 217 51.2
FAN02G4604 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.0e-46 189.9 217 52.1
CANSAT01G1710 Cannabis sativa HOM05D002002 ORTHO05D003658 3.3e-46 189.1 198 56.1
CSS0040170 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D003658 7.4e-46 188.0 207 51.2
Hma1.2p1_0160F.1_g071270 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 2.8e-45 186.0 206 51.0
Eucgr.B03286 Eucalyptus grandis HOM05D002002 ORTHO05D003658 8.2e-45 184.5 222 48.6
FAN14G2025 Fragaria x ananassa HOM05D002002 ORTHO05D003658 1.8e-44 183.3 212 50.9
PGR102G0007 Punica granatum HOM05D002002 ORTHO05D003658 9.1e-44 181.0 180 55.0
TWI36G0682 Tripterygium wilfordii HOM05D002002 ORTHO05D003658 1.2e-43 180.6 170 55.3
Cpa.g.sc33.19 Carica papaya HOM05D002002 ORTHO05D008711 5.9e-43 178.3 196 48.5
Oeu056712.1 Olea europaea HOM05D002002 ORTHO05D013431 6.5e-42 174.9 205 45.9
Dinv24784 Davidia involucrata HOM05D002002 ORTHO05D003658 1.4e-41 173.7 160 56.2
Lj6P812T18 Lonicera japonica HOM05D002002 ORTHO05D003658 2.5e-41 172.9 178 52.2
Cc11_g15730 Coffea canephora HOM05D002002 ORTHO05D008711 4.2e-41 172.2 178 48.9
FvH4_6g24840 Fragaria vesca HOM05D002002 ORTHO05D003658 7.2e-41 171.4 205 49.8
DCAR_031154 Daucus carota HOM05D002002 ORTHO05D003658 4.7e-40 168.7 208 49.5
Lj3C1058T7 Lonicera japonica HOM05D002002 ORTHO05D008711 6.7e-39 164.9 228 47.4
MBI10_g11201_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 1.3e-37 160.6 208 44.2
Gohir.A03G135305 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.7e-37 160.2 137 57.7
DCAR_024430 Daucus carota HOM05D002002 ORTHO05D008711 2.2e-37 159.8 183 48.1
Phvul.003G065000 Phaseolus vulgaris HOM05D002002 ORTHO05D003658 4.1e-36 155.6 287 36.9
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 5.3e-36 155.2 187 44.9
Aqoxy5G03765 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 1.0e-34 151.0 188 44.7
Lj4g0014379 Lotus japonicus HOM05D002002 ORTHO05D003658 8.5e-34 147.9 275 36.0
VMungo0251G0889 Vigna mungo HOM05D002002 ORTHO05D003658 1.9e-33 146.7 282 36.5
Lj2g0007304 Lotus japonicus HOM05D002002 ORTHO05D003658 1.2e-32 144.1 245 41.2
ECA233G4313 Erigeron canadensis HOM05D002002 ORTHO05D008711 1.6e-32 143.7 171 45.0
ATR0824G058 Amborella trichopoda HOM05D002002 ORTHO05D003658 4.7e-32 142.1 169 45.6
Migut.E00200 Erythranthe guttata HOM05D002002 ORTHO05D003658 6.1e-32 141.7 188 43.6
Glyma.01G025900 Glycine max HOM05D002002 ORTHO05D003658 1.4e-31 140.6 245 37.6
Peaxi162Scf00128g00135 Petunia axillaris HOM05D002002 ORTHO05D008711 4.0e-31 139.0 194 43.3
Migut.K00599 Erythranthe guttata HOM05D002002 ORTHO05D003658 1.3e-29 134.0 168 44.6
TPR.G17746 Trifolium pratense HOM05D002002 ORTHO05D003658 3.7e-29 132.5 234 35.9
Sopen05g008380 Solanum pennellii HOM05D002002 ORTHO05D003658 3.1e-28 129.4 172 43.0
QL03p058095 Quercus lobata HOM05D002002 ORTHO05D003658 4.1e-28 129.0 148 51.4
Nitab4.5_0000007g0050 Nicotiana tabacum HOM05D002002 ORTHO05D008711 7.0e-28 128.3 171 43.3
Oeu023068.1 Olea europaea HOM05D002002 ORTHO05D003658 9.1e-28 127.9 186 39.8
Phvul.002G149900 Phaseolus vulgaris HOM05D002002 ORTHO05D003658 2.0e-27 126.7 260 35.0
Glyma.02G038900 Glycine max HOM05D002002 ORTHO05D003658 3.5e-27 125.9 258 34.9
CAN.G832.2 Capsicum annuum HOM05D002002 ORTHO05D008711 1.7e-26 123.6 185 42.2
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 2.2e-26 123.2 206 37.4
Nitab4.5_0003609g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008711 8.5e-26 121.3 149 46.3
Sed0021898 Sechium edule HOM05D002002 ORTHO05D003658 1.2e-24 117.5 220 38.6
TAR374G1279 Trochodendron aralioides HOM05D002002 ORTHO05D003658 1.5e-22 110.5 95 53.7
Psat2g100360 Pisum sativum HOM05D002002 ORTHO05D003658 1.3e-21 107.5 178 36.0
ClCG08G017700 Citrullus lanatus HOM05D002002 ORTHO05D003658 9.1e-20 101.3 196 33.7
MELO3C010690.2 Cucumis melo HOM05D002002 ORTHO05D003658 9.1e-20 101.3 204 35.3
VMungo1215G2343 Vigna mungo HOM05D000068 ORTHO05D004691 4.5e-19 99.0 113 46.9
Oeu009141.2 Olea europaea HOM05D002002 ORTHO05D003658 1.3e-18 97.4 88 48.9
DCAR_021086 Daucus carota HOM05D002002 ORTHO05D003658 2.3e-18 96.7 200 33.0
CsaV3_2G024930 Cucumis sativus L. HOM05D002002 ORTHO05D003658 4.2e-17 92.4 206 32.5
Migut.M00058 Erythranthe guttata HOM05D002002 ORTHO05D003658 5.5e-17 92.0 110 43.6
TAR626G0223 Trochodendron aralioides HOM05D002002 ORTHO05D003658 7.2e-17 91.7 179 33.5
Oeu034272.1 Olea europaea HOM05D002002 ORTHO05D003658 1.2e-16 90.9 175 34.3
Oeu034273.1 Olea europaea HOM05D002002 ORTHO05D003658 1.2e-16 90.9 175 34.3
CiPaw.03G283400 Carya illinoinensis HOM05D002002 ORTHO05D003658 2.8e-16 89.7 181 33.7
DCAR_019665 Daucus carota HOM05D002002 ORTHO05D003658 1.0e-15 87.8 91 44.0
Potri.002G217100 Populus trichocarpa HOM05D002002 ORTHO05D003658 1.8e-15 87.0 159 34.0
Haze_12592 Corylus avellana HOM05D002002 ORTHO05D003658 4.0e-15 85.9 202 30.2
Manes.12G063951 Manihot esculenta HOM05D002002 ORTHO05D003658 6.8e-15 85.1 165 32.1
HanXRQChr10g0306811 Helianthus annuus HOM05D002002 ORTHO05D003658 8.8e-15 84.7 112 33.9
Prupe.3G195300 Prunus persica HOM05D002002 ORTHO05D003658 8.8e-15 84.7 112 39.3
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 1.5e-14 84.0 72 50.0
FAN05G3832 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.0e-14 83.6 111 40.5
COL.COLO4_19649 Corchorus olitorius HOM05D002002 ORTHO05D003658 2.6e-14 83.2 117 41.0
FAN02G0217 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.6e-14 83.2 77 48.1
Actinidia35198 Actinidia chinensis HOM05D002148 ORTHO05D002547 3.4e-14 82.8 201 30.3
ECA234G3591 Erigeron canadensis HOM05D002002 ORTHO05D003658 5.7e-14 82.0 188 29.3
RcHm_v2.0_Chr2g0155671 Rosa chinensis HOM05D002002 ORTHO05D003658 5.7e-14 82.0 71 49.3
FvH4_6g40440 Fragaria vesca HOM05D002002 ORTHO05D003658 9.8e-14 81.3 165 32.7
Lsat_1_v5_gn_5_122320 Lactuca sativa HOM05D002002 ORTHO05D003658 9.8e-14 81.3 75 46.7
Aqoxy6G00290 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 1.3e-13 80.9 183 30.1
Cfa014206 Carpinus fangiana HOM05D002002 ORTHO05D003658 1.3e-13 80.9 181 29.8
FAN14G1296 Fragaria x ananassa HOM05D002002 ORTHO05D003658 1.3e-13 80.9 165 32.7
MD09G1129900 Malus domestica HOM05D002002 ORTHO05D003658 1.3e-13 80.9 187 31.6
Nitab4.5_0001229g0060 Nicotiana tabacum HOM05D002002 ORTHO05D003658 2.2e-13 80.1 78 42.3
Nitab4.5_0013754g0020 Nicotiana tabacum HOM05D002002 ORTHO05D003658 2.2e-13 80.1 110 37.3
MSTRG.14910 Avicennia marina HOM05D002002 ORTHO05D003658 2.8e-13 79.7 85 41.2
MD17G1118900 Malus domestica HOM05D002002 ORTHO05D003658 3.7e-13 79.3 187 29.4
FAN09G2779 Fragaria x ananassa HOM05D002002 ORTHO05D003658 4.9e-13 79.0 131 34.4
Solyc12g006190.1 Solanum lycopersicum HOM05D002002 ORTHO05D003658 6.3e-13 78.6 76 44.7
Sopen12g002150 Solanum pennellii HOM05D002002 ORTHO05D003658 6.3e-13 78.6 76 44.7
Peaxi162Scf00047g02117 Petunia axillaris HOM05D002002 ORTHO05D003658 8.3e-13 78.2 182 30.2
PGSC0003DMG400028833 Solanum tuberosum HOM05D002002 ORTHO05D003658 1.4e-12 77.4 175 30.3
MBI15_g44612_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 1.8e-12 77.0 134 33.6
Cpa.g.sc136.48 Carica papaya HOM05D002002 ORTHO05D003658 2.4e-12 76.6 106 40.6
Cc05_g02030 Coffea canephora HOM05D002002 ORTHO05D003658 2.4e-12 76.6 187 28.9
Zm00001eb064330 Zea mays HOM05D002002 ORTHO05D003658 2.7e-11 73.2 148 32.4
Gohir.D07G199350 Gossypium hirsutum HOM05D002002 ORTHO05D003658 3.5e-11 72.8 129 34.9
Thecc.01G199000 Theobroma cacao HOM05D002002 ORTHO05D003658 5.9e-11 72.0 128 34.4
Gorai.001G223200 Gossypium raimondii HOM05D002002 ORTHO05D003658 1.3e-10 70.9 129 34.9
QL04p067058 Quercus lobata HOM05D002002 ORTHO05D003658 1.3e-10 70.9 162 31.5
HanXRQChr08g0235831 Helianthus annuus HOM05D007028 ORTHO05D003658 2.3e-10 70.1 83 37.3
Gohir.A07G193000 Gossypium hirsutum HOM05D002002 ORTHO05D003658 3.8e-10 69.3 129 32.6
Migut.D01094 Erythranthe guttata HOM05D007028 ORTHO05D003658 5.0e-10 68.9 97 38.1
Zm00001eb210880 Zea mays HOM05D002002 ORTHO05D003658 5.0e-10 68.9 95 38.9
arahy.Tifrunner.gnm1.ann1.SE9SAL Arachis hypogaea HOM05D007028 ORTHO05D003658 8.6e-10 68.2 85 41.2
Hma1.2p1_0629F.1_g192180 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 8.6e-10 68.2 117 31.6
Ca_04572_v3 Cicer arietinum L. HOM05D002002 ORTHO05D003658 1.9e-09 67.0 68 50.0
ATR0749G015 Amborella trichopoda HOM05D007028 ORTHO05D003658 4.3e-09 65.9 88 38.6
Dinv23308 Davidia involucrata HOM05D007028 ORTHO05D010012 4.3e-09 65.9 90 38.9
Potri.014G170000 Populus trichocarpa HOM05D002002 ORTHO05D003658 4.3e-09 65.9 168 32.1
Actinidia25445 Actinidia chinensis HOM05D007028 ORTHO05D010012 7.3e-09 65.1 77 39.0
Os06g0568400 Oryza sativa ssp. japonica HOM05D007028 ORTHO05D003658 9.5e-09 64.7 71 43.7
QL05p034297 Quercus lobata HOM05D007028 ORTHO05D003658 9.5e-09 64.7 77 40.3
Ciclev10017528m.g Citrus clementina HOM05D002002 ORTHO05D003658 1.6e-08 63.9 170 30.0
Lsat_1_v5_gn_8_100120 Lactuca sativa HOM05D007028 ORTHO05D003658 1.6e-08 63.9 83 33.7
Potri.003G179600 Populus trichocarpa HOM05D007028 ORTHO05D003658 1.6e-08 63.9 114 36.0
Oeu010371.1 Olea europaea HOM05D007028 ORTHO05D003658 2.8e-08 63.2 71 40.8
Phvul.005G180900 Phaseolus vulgaris HOM05D007028 ORTHO05D003658 2.8e-08 63.2 73 42.5
Prupe.3G095700 Prunus persica HOM05D007028 ORTHO05D003658 3.6e-08 62.8 100 35.0
Cc04_g04860 Coffea canephora HOM05D007028 ORTHO05D003658 4.7e-08 62.4 74 37.8
MBI04_g44678_MAGBIO Magnolia biondii HOM05D007028 ORTHO05D003658 4.7e-08 62.4 86 34.9
Migut.I00721 Erythranthe guttata HOM05D007028 ORTHO05D003658 6.1e-08 62.0 87 35.6
FvH4_6g28900 Fragaria vesca HOM05D007028 ORTHO05D003658 6.1e-08 62.0 159 28.9
Os03g0844850 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D003658 6.1e-08 62.0 103 34.0
Manes.11G063900 Manihot esculenta HOM05D007028 ORTHO05D003658 8.0e-08 61.6 84 35.7
Zm00001eb385060 Zea mays HOM05D007028 ORTHO05D003658 8.0e-08 61.6 89 34.8
FAN02G1822 Fragaria x ananassa HOM05D007028 ORTHO05D003658 1.0e-07 61.2 159 28.9
MD17G1220000 Malus domestica HOM05D007028 ORTHO05D003658 1.0e-07 61.2 100 33.0
Medtr5g033070 Medicago truncatula HOM05D002002 ORTHO05D003658 1.4e-07 60.8 87 42.5
TPR.G38725 Trifolium pratense HOM05D002002 ORTHO05D003658 1.8e-07 60.5 66 47.0
ECA238G1648 Erigeron canadensis HOM05D007028 ORTHO05D003658 2.3e-07 60.1 72 38.9
Medtr2g104800 Medicago truncatula HOM05D007028 ORTHO05D003658 2.3e-07 60.1 84 38.1
FAN14G4516 Fragaria x ananassa HOM05D007028 ORTHO05D003658 3.0e-07 59.7 149 28.9
TPR.G19149 Trifolium pratense HOM05D007028 ORTHO05D003658 3.0e-07 59.7 84 39.3
VMungo1080G1428 Vigna mungo HOM05D007028 ORTHO05D003658 3.0e-07 59.7 73 39.7
Glyma.13G369200 Glycine max HOM05D007028 ORTHO05D003658 4.0e-07 59.3 77 41.6
Thecc.06G037900 Theobroma cacao HOM05D007028 ORTHO05D003658 4.0e-07 59.3 75 38.7
FAN05G3224 Fragaria x ananassa HOM05D007028 ORTHO05D003658 5.2e-07 58.9 149 28.9
FAN09G0870 Fragaria x ananassa HOM05D007028 ORTHO05D003658 5.2e-07 58.9 149 28.9
Oeu043137.1 Olea europaea HOM05D007028 ORTHO05D003658 5.2e-07 58.9 68 41.2
Cfa001903 Carpinus fangiana HOM05D007028 ORTHO05D003658 6.8e-07 58.5 144 30.6
ClCG09G009040 Citrullus lanatus HOM05D007028 ORTHO05D003658 6.8e-07 58.5 72 37.5
DCAR_007440 Daucus carota HOM05D007028 ORTHO05D003658 6.8e-07 58.5 136 30.1
Cpa.g.sc10.116 Carica papaya HOM05D007028 ORTHO05D003658 1.2e-06 57.8 174 27.0
MELO3C021015.2 Cucumis melo HOM05D007028 ORTHO05D003658 1.5e-06 57.4 72 38.9
Ciclev10027378m.g Citrus clementina HOM05D007028 ORTHO05D003658 2.0e-06 57.0 82 35.4
Cc01_g17020 Coffea canephora HOM05D007028 ORTHO05D003658 2.6e-06 56.6 77 31.2
COL.COLO4_26654 Corchorus olitorius HOM05D007028 ORTHO05D003658 2.6e-06 56.6 70 37.1
Gohir.D05G121800 Gossypium hirsutum HOM05D007028 ORTHO05D003658 2.6e-06 56.6 126 29.4
Lsat_1_v5_gn_2_16281 Lactuca sativa HOM05D007028 ORTHO05D003658 4.4e-06 55.8 68 36.8
CsaV3_7G025940 Cucumis sativus L. HOM05D007028 ORTHO05D003658 5.7e-06 55.5 68 35.3
Migut.N00615 Erythranthe guttata HOM05D007028 ORTHO05D003658 5.7e-06 55.5 81 34.6
Solyc03g117170.1 Solanum lycopersicum HOM05D007028 ORTHO05D003658 5.7e-06 55.5 151 25.8
Glyma.08G282202 Glycine max HOM05D002002 ORTHO05D003658 9.8e-06 54.7 80 41.2


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