Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 0.0e+00 1216.1 633 100.0
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.8e-208 729.2 653 63.6
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 8.0e-208 727.6 654 63.8
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 6.8e-199 698.0 661 62.9
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 3.4e-198 695.7 580 67.1
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 7.1e-196 688.0 551 68.1
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.0e-194 684.1 735 57.3
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 8.6e-194 681.0 655 61.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 5.6e-193 678.3 663 60.5
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.6e-192 676.8 545 69.0
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.1e-192 676.4 586 64.5
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.2e-192 674.9 657 60.9
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.3e-191 672.9 633 62.2
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 5.2e-191 671.8 561 66.3
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 5.2e-191 671.8 668 59.3
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 5.2e-191 671.8 668 60.9
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 9.2e-188 661.0 549 65.2
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 6.0e-187 658.3 696 57.6
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 3.0e-186 656.0 588 64.3
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 3.9e-186 655.6 658 59.0
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 8.4e-181 637.9 566 62.9
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 8.4e-181 637.9 617 60.3
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.1e-180 637.5 654 58.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.4e-180 637.1 644 57.1
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.9e-180 636.7 571 62.3
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 7.1e-180 634.8 659 58.0
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 9.3e-180 634.4 653 58.5
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 9.3e-180 634.4 573 62.3
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 9.3e-180 634.4 663 58.2
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 4.6e-179 632.1 660 57.9
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.0e-178 630.9 659 57.1
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.3e-178 630.6 587 60.6
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 2.3e-178 629.8 653 57.6
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.5e-177 627.1 654 56.4
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.3e-177 625.9 662 57.1
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 4.3e-177 625.5 637 58.1
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.8e-176 622.9 659 57.1
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.8e-176 622.1 657 57.7
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.4e-175 620.5 559 60.1
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.8e-175 620.2 664 56.3
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 6.9e-175 618.2 659 56.6
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 9.0e-175 617.8 545 63.9
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.2e-174 617.5 613 60.4
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 1.2e-174 617.5 662 56.2
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.6e-174 616.3 663 56.7
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 4.4e-174 615.5 657 57.2
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 5.8e-174 615.1 652 56.9
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 7.6e-174 614.8 594 60.6
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 9.9e-174 614.4 601 60.6
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.7e-173 613.6 649 56.9
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 6.4e-173 611.7 661 55.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 8.4e-173 611.3 574 60.5
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 3.2e-172 609.4 549 61.4
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 4.2e-172 609.0 650 56.3
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 9.3e-172 607.8 659 56.6
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.1e-171 606.7 587 59.3
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 3.5e-171 605.9 540 60.9
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 6.6e-170 601.7 551 61.0
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 6.6e-170 601.7 659 55.8
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 1.6e-168 597.0 659 55.2
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 3.1e-167 592.8 551 60.8
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 4.0e-167 592.4 561 60.6
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 6.9e-167 591.7 578 58.3
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.2e-166 590.9 649 55.5
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.6e-166 589.7 552 60.9
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 2.9e-165 586.3 531 60.8
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 8.4e-165 584.7 547 60.0
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 1.4e-164 583.9 564 59.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 7.1e-164 581.6 538 60.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 2.3e-162 576.6 662 56.3
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.1e-161 574.3 573 58.1
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.6e-160 570.5 663 52.5
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.5e-158 562.4 637 53.5
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 5.8e-158 562.0 548 59.5
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 2.5e-156 556.6 559 59.2
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-154 550.8 544 58.3
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 6.7e-154 548.5 554 56.7
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 2.5e-153 546.6 528 58.0
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.1e-147 526.9 587 56.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 7.4e-145 518.5 479 60.8
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.7e-137 492.3 579 55.4
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 3.6e-131 473.0 550 52.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.5e-129 467.6 562 50.0
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.2e-128 463.8 464 58.0
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 8.0e-123 445.3 490 56.9
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 5.9e-118 429.1 465 57.8
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 3.2e-116 423.3 427 59.7
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.2e-115 421.4 547 46.4
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 1.7e-112 411.0 458 55.9
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.1e-111 406.8 451 55.9
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 3.4e-105 386.7 564 44.0
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.6e-99 367.9 425 54.8
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 2.8e-99 367.1 383 58.0
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 5.8e-89 332.8 314 58.3
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.4e-81 307.0 445 46.3
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 7.6e-73 279.3 410 47.6
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.4e-66 258.5 583 35.8
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 7.6e-65 252.7 299 51.8
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 3.1e-50 204.1 174 64.9
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.0e-40 172.6 562 29.9
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.4e-31 142.1 97 67.0
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.4e-31 142.1 145 53.1
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.0e-29 134.4 162 48.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.1e-26 122.9 162 46.9
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.0e-25 121.7 119 54.6
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.4e-21 109.0 342 28.4
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 6.7e-21 106.7 119 54.6
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.3e-19 102.4 62 79.0
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 8.2e-19 99.8 124 49.2
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.8e-18 98.6 100 54.0
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 1.7e-16 92.0 86 54.7
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 5.5e-15 87.0 85 52.9
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 5.2e-13 80.5 190 32.1
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 2.0e-09 68.6 86 50.0


User provided reference genes

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