Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G018975 Manihot esculenta HOM05D000004 ORTHO05D000002 2.7e-129 465.3 229 100.0
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-18 96.7 124 37.9
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 3.3e-18 96.3 124 37.1
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 5.6e-18 95.5 223 28.7
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-17 94.4 187 30.5
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-16 90.9 130 35.4
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.2e-16 89.0 186 30.6
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-16 88.6 146 28.8
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-15 87.0 149 30.9
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 5.8e-15 85.5 137 32.8
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 7.6e-15 85.1 186 30.6
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.6e-15 85.1 139 31.7
FvH4_4g06701 Fragaria vesca HOM05D000004 ORTHO05D000378 7.6e-15 85.1 289 25.3
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 1.7e-14 84.0 131 34.4
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-14 84.0 146 31.5
SEGI_04019 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.9e-14 83.2 127 32.3
SEGI_40029 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.9e-14 83.2 127 32.3
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 186 30.1
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 186 30.1
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 186 30.1
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 186 30.1
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 186 30.1
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.4e-14 82.0 100 38.0
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-14 82.0 146 30.8
CAN.G8386.1 Capsicum annuum HOM05D000004 ORTHO05D000002 8.4e-14 81.6 186 30.1
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-13 81.3 109 34.9
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 1.4e-13 80.9 137 31.4
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-13 80.9 118 32.2
RcHm_v2.0_Chr2g0149861 Rosa chinensis HOM05D000004 ORTHO05D000002 1.9e-13 80.5 125 31.2
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-13 80.5 146 30.1
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-13 79.7 146 29.5
CAN.G2189.3 Capsicum annuum HOM05D000004 ORTHO05D000002 7.1e-13 78.6 186 29.6
Sopen02g011330 Solanum pennellii HOM05D000004 ORTHO05D008835 7.1e-13 78.6 128 32.8
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-13 78.2 131 32.8
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-12 77.8 149 28.9
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 1.6e-12 77.4 125 30.4
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-12 77.4 186 27.4
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 127 32.3
SEGI_25895 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.7e-12 76.6 105 35.2
SEGI_35312 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.7e-12 76.6 99 34.3
Sopen02g008020 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-12 75.9 116 31.0
Sopen02g009980 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-12 75.9 118 29.7
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-12 75.5 129 31.0
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-12 75.5 146 28.8
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 7.8e-12 75.1 124 32.3
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 1.7e-11 73.9 119 29.4
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 2.3e-11 73.6 182 25.8
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 2.3e-11 73.6 126 28.6
SEGI_19024 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.0e-11 73.2 108 31.5
Sopen02g010000 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-11 73.2 148 27.7
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-11 72.8 96 34.4
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-11 72.8 96 34.4
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-11 72.8 96 34.4
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-11 72.8 96 34.4
Sopen02g009970 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-11 72.8 135 28.9
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-11 72.8 127 30.7
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 5.1e-11 72.4 116 31.9
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.6e-11 72.0 124 29.8
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-11 72.0 128 29.7
Sopen02g007870 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-11 72.0 127 29.1
Sopen02g009990 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-11 72.0 146 27.4
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-11 71.6 188 26.1
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-11 71.6 108 32.4
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-11 71.6 127 29.9
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.5e-10 70.9 161 27.3
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 28.3
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-10 70.9 127 29.9
Sopen01g009130 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-10 70.1 115 29.6
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-10 70.1 127 29.9
SHI01939 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-10 69.7 95 32.6
Sp7g07400 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.3e-10 69.3 188 25.5
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 69.3 127 29.1
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 69.3 127 29.1
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 69.3 139 29.5
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 5.6e-10 68.9 153 26.8
SEGI_18102 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.6e-10 68.9 99 33.3
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-10 68.9 108 31.5
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-10 68.2 188 23.9
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-10 68.2 126 28.6
SEGI_10156 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-09 67.8 119 31.9
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 67.8 127 29.1
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 67.8 188 24.5
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 67.8 108 31.5
Rhsim05G0156800 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.8e-09 66.6 96 31.2
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-09 66.2 190 24.2
Sopen05g012240 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-09 65.9 126 27.8
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-09 65.9 127 28.3
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-09 65.9 126 26.2
EL10As7g23738 Beta vulgaris HOM05D000004 ORTHO05D000002 6.2e-09 65.5 91 35.2
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-09 65.5 127 29.1
SHI12100 Sapria himalayana HOM05D000004 ORTHO05D000002 8.1e-09 65.1 95 31.6
Sopen01g009890 Solanum pennellii HOM05D000004 ORTHO05D000378 1.1e-08 64.7 97 32.0
SHI10874 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-08 63.9 100 28.0
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.9 108 30.6
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.9 188 24.5
Sopen08g009080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.9 113 29.2
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.1e-08 63.2 169 24.3
Duzib138G1071 Durio zibethinus HOM05D000004 ORTHO05D000378 4.0e-08 62.8 81 35.8
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 5.3e-08 62.4 223 23.3
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-08 62.4 127 27.6
Sopen11g021390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-08 62.4 108 30.6
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-08 62.0 125 27.2
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-08 62.0 127 27.6
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.8 118 28.0
Sopen08g009610 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.8 109 29.4
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-07 60.5 144 26.4
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-07 59.7 150 24.0
EL10Ac3g06607 Beta vulgaris HOM05D000004 ORTHO05D000002 4.4e-07 59.3 195 25.6
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-07 59.3 87 34.5
SEGI_29490 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.8e-07 58.9 72 36.1
Sp7g04980 Schrenkiella parvula HOM05D000691 ORTHO05D000378 7.6e-07 58.5 84 33.3
SEGI_02097 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.6e-07 58.5 56 37.5
Sopen09g011920 Solanum pennellii HOM05D000691 ORTHO05D000378 7.6e-07 58.5 124 26.6
SHI29939 Sapria himalayana HOM05D000004 ORTHO05D000002 9.9e-07 58.2 118 27.1
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 111 27.9
SEGI_01913 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-06 57.8 87 31.0
SHI25401 Sapria himalayana HOM05D000004 ORTHO05D000378 2.2e-06 57.0 102 24.5
Sc17g0004620 Simmondsia chinensis HOM05D001091 ORTHO05D001020 2.9e-06 56.6 84 29.8
Sopen07g018230 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-06 56.6 119 26.1
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-06 56.2 81 34.6
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.4e-06 55.5 96 31.2
SEGI_12413 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.4e-06 55.5 66 37.9
Sopen01g021200 Solanum pennellii HOM05D000004 ORTHO05D000378 6.4e-06 55.5 113 28.3
Sopen02g010150 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-06 55.5 93 30.1
Ah.07g206620 Amaranthus hybridus HOM05D000041 ORTHO05D000061 8.4e-06 55.1 101 31.7
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 8.4e-06 55.1 75 32.0


User provided reference genes

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