Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 1.3e-51 206.1 105 100.0
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 3.7e-25 118.2 105 53.3
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 8.2e-25 117.1 100 59.0
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 7.0e-24 114.0 112 55.4
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 3.5e-23 111.7 99 56.6
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 7.7e-23 110.5 108 56.5
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 2.2e-22 109.0 98 60.2
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 6.5e-22 107.5 107 52.3
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 6.5e-22 107.5 88 55.7
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 6.5e-22 107.5 108 55.6
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 6.5e-22 107.5 92 58.7
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 1.1e-21 106.7 101 52.5
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.9e-21 105.9 106 53.8
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 1.9e-21 105.9 102 51.0
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 2.5e-21 105.5 96 57.3
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 4.2e-21 104.8 88 54.5
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 1.2e-20 103.2 88 54.5
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 1.6e-20 102.8 112 49.1
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 2.7e-20 102.1 101 54.5
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 4.0e-19 98.2 108 48.1
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 4.0e-19 98.2 96 56.2
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 8.8e-19 97.1 125 40.0
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.2e-18 96.7 95 52.6
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 1.2e-18 96.7 144 40.3
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 1.5e-18 96.3 98 51.0
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 1.5e-18 96.3 129 45.7
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 1.5e-18 96.3 102 49.0
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 3.4e-18 95.1 97 49.5
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 4.4e-18 94.7 120 43.3
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 5.7e-18 94.4 106 46.2
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 9.8e-18 93.6 120 43.3
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 2.8e-17 92.0 109 50.5
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 3.7e-17 91.7 109 50.5
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 3.7e-17 91.7 110 45.5
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 8.3e-17 90.5 84 56.0
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 1.1e-16 90.1 85 51.8
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 1.4e-16 89.7 109 47.7
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 4.1e-16 88.2 135 38.5
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 9.1e-16 87.0 108 44.4
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.6e-15 86.3 109 45.9
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 5.9e-15 84.3 102 45.1
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 1.0e-14 83.6 110 42.7
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 1.0e-14 83.6 86 52.3
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.2e-14 82.4 87 47.1
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 6.5e-14 80.9 97 40.2
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 8.5e-14 80.5 101 43.6
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.5e-13 79.0 84 46.4
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 3.2e-13 78.6 120 40.8
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 5.5e-13 77.8 83 50.6
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 5.5e-13 77.8 103 42.7
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 8.0e-12 73.9 97 39.2
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 9.8e-10 67.0 87 41.4
ECA233G4326 Erigeron canadensis HOM05D008446 ORTHO05D010616 1.8e-08 62.8 124 34.7
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 4.5e-07 58.2 59 49.2
Sabra08G0134300 Salix brachista HOM05D008446 ORTHO05D010616 4.5e-07 58.2 69 50.7


User provided reference genes

Program Settings