Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 2.7e-145 518.8 297 100.0
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.6e-44 184.1 303 40.3
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.1e-42 177.9 190 53.7
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.5e-42 177.6 221 48.4
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 1.9e-42 177.2 205 47.3
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.2e-42 176.4 221 48.9
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 1.0e-40 171.4 296 38.5
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.4e-40 171.0 210 48.6
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 7.5e-39 165.2 318 41.5
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 9.7e-39 164.9 301 36.2
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 6.3e-38 162.2 215 44.7
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 9.1e-37 158.3 218 45.4
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 5.9e-36 155.6 290 37.2
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 7.7e-36 155.2 187 43.9
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-35 154.5 173 49.1
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-35 154.5 173 49.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 1.7e-35 154.1 170 47.6
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 1.9e-34 150.6 221 42.5
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 5.5e-34 149.1 208 41.8
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 7.2e-34 148.7 182 46.7
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 9.4e-34 148.3 282 36.2
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 6.1e-33 145.6 178 46.1
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 8.0e-33 145.2 210 41.9
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 6.8e-32 142.1 299 33.8
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.0e-31 140.6 171 41.5
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 7.5e-31 138.7 209 40.2
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 1.3e-30 137.9 214 37.9
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.3e-30 137.9 159 44.7
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 1.3e-30 137.9 160 45.0
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 3.7e-30 136.3 212 41.0
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 1.1e-29 134.8 308 32.8
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 4.1e-29 132.9 215 41.4
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 4.1e-29 132.9 190 39.5
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 5.4e-29 132.5 210 38.6
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 7.0e-29 132.1 154 46.1
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.7e-28 130.2 180 41.1
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 3.5e-28 129.8 157 44.6
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 4.5e-28 129.4 295 32.2
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 4.5e-28 129.4 177 46.3
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 5.9e-28 129.0 210 38.6
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 7.7e-28 128.6 175 42.9
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.0e-27 128.3 155 42.6
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 3.8e-27 126.3 178 40.4
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 8.6e-27 125.2 195 40.5
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.1e-26 124.8 179 38.0
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 1.1e-26 124.8 158 41.8
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.1e-26 124.8 198 37.9
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 1.9e-26 124.0 140 44.3
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 7.2e-26 122.1 299 33.8
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 7.2e-26 122.1 166 41.6
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 7.2e-26 122.1 195 40.0
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 7.2e-26 122.1 166 43.4
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.2e-25 121.3 158 41.8
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.6e-25 120.9 195 39.5
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 1.6e-25 120.9 211 36.0
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 3.6e-25 119.8 294 34.7
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 3.6e-25 119.8 179 38.5
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 6.1e-25 119.0 214 36.9
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 8.0e-25 118.6 211 35.1
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 2.3e-24 117.1 287 35.2
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.5e-23 114.4 130 43.8
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 2.6e-23 113.6 203 35.0
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.8e-22 110.2 294 30.6
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 6.3e-22 109.0 197 37.1
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.4e-21 107.1 294 30.3
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.4e-21 107.1 294 30.3
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 5.9e-20 102.4 183 36.1
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 4.3e-18 96.3 102 49.0
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.6e-17 94.4 115 43.5
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 2.1e-17 94.0 121 44.6
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 3.6e-17 93.2 159 34.0
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 5.2e-16 89.4 206 31.6
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 6.8e-16 89.0 204 30.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 6.8e-16 89.0 204 30.4
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 6.8e-16 89.0 272 29.8
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 8.9e-16 88.6 202 28.2
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 2.0e-15 87.4 166 31.9
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 2.6e-15 87.0 206 29.6
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 5.8e-15 85.9 168 32.1
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 7.5e-15 85.5 102 47.1
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 3.7e-14 83.2 133 36.1
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 1.1e-13 81.6 157 31.8
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 5.4e-13 79.3 206 29.6
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 7.0e-13 79.0 186 31.7
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 1.2e-12 78.2 207 28.0
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 1.6e-12 77.8 139 35.3
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 2.7e-12 77.0 190 30.5
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 3.3e-10 70.1 111 35.1
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 7.3e-10 68.9 123 38.2
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 1.6e-09 67.8 148 31.8
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 2.0e-07 60.8 132 33.3
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 3.4e-07 60.1 174 31.6


User provided reference genes

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