Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 2.0e-89 332.4 165 100.0
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 3.1e-58 228.8 159 75.5
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 1.9e-55 219.5 169 65.1
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 7.0e-55 217.6 165 67.3
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 4.6e-54 214.9 161 69.6
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 7.8e-54 214.2 167 64.7
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 3.9e-53 211.8 168 65.5
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 3.9e-53 211.8 156 67.3
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 3.9e-53 211.8 161 66.5
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 8.6e-53 210.7 162 67.3
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 8.6e-53 210.7 159 69.2
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 1.5e-52 209.9 165 67.9
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 1.9e-52 209.5 170 64.7
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 2.5e-52 209.1 159 67.3
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 3.3e-52 208.8 149 71.1
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 5.6e-52 208.0 168 64.3
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 5.6e-52 208.0 158 66.5
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 7.3e-52 207.6 168 66.7
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 1.2e-51 206.8 167 63.5
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 1.2e-51 206.8 140 69.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 2.8e-51 205.7 142 71.8
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.8e-51 205.7 161 64.6
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 4.7e-51 204.9 145 66.2
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 4.7e-51 204.9 164 63.4
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 6.2e-51 204.5 142 70.4
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 6.2e-51 204.5 142 70.4
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.4e-50 203.4 165 63.0
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 2.3e-50 202.6 167 58.7
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 3.1e-50 202.2 164 59.8
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 5.2e-50 201.4 162 63.6
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.5e-49 199.9 171 61.4
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 2.6e-49 199.1 151 65.6
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 4.4e-49 198.4 164 62.8
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 7.5e-49 197.6 173 57.2
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 9.8e-49 197.2 163 60.1
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.3e-48 196.8 171 60.8
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.7e-48 195.3 166 59.0
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 3.7e-48 195.3 167 59.9
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 6.4e-48 194.5 161 64.0
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 1.4e-47 193.4 168 59.5
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 3.2e-47 192.2 151 66.2
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 4.1e-47 191.8 143 64.3
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 2.1e-46 189.5 144 66.7
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.7e-46 189.1 102 85.3
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 3.5e-46 188.7 167 61.1
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 1.0e-45 187.2 167 60.5
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 5.1e-45 184.9 167 59.9
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 1.5e-44 183.3 126 66.7
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 3.3e-44 182.2 170 60.6
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 5.6e-44 181.4 159 59.1
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 9.5e-44 180.6 160 56.9
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 1.2e-43 180.3 159 58.5
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 2.1e-43 179.5 159 58.5
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 3.6e-43 178.7 164 60.4
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 6.2e-43 177.9 163 55.2
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 1.1e-42 177.2 136 62.5
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 1.4e-42 176.8 144 62.5
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 3.1e-42 175.6 157 58.6
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 5.2e-42 174.9 121 67.8
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 5.2e-42 174.9 197 46.7
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.6e-41 172.6 192 51.0
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 3.4e-41 172.2 153 56.9
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 7.6e-41 171.0 157 58.0
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.7e-40 169.9 108 73.1
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 6.4e-40 167.9 141 60.3
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 1.1e-39 167.2 162 54.3
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 1.4e-39 166.8 135 56.3
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 1.9e-39 166.4 155 56.1
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 1.9e-39 166.4 155 59.4
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 1.9e-39 166.4 159 55.3
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 2.4e-39 166.0 120 63.3
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 4.1e-39 165.2 181 50.3
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 7.1e-39 164.5 134 58.2
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 6.0e-38 161.4 137 58.4
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 3.9e-37 158.7 170 51.2
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 5.1e-37 158.3 169 52.7
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 6.6e-37 157.9 123 59.3
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 8.6e-37 157.5 118 62.7
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 4.3e-36 155.2 132 63.6
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 5.6e-36 154.8 164 50.6
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 6.2e-35 151.4 163 51.5
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.1e-34 150.6 165 49.7
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.1e-34 150.6 124 57.3
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 2.4e-34 149.4 163 50.9
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.4e-34 149.4 163 50.9
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 4.0e-34 148.7 81 84.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 8.9e-34 147.5 163 50.9
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.4e-31 139.4 76 84.2
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 5.1e-29 131.7 134 56.0
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 4.8e-27 125.2 144 49.3
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 1.2e-25 120.6 76 75.0
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.1e-23 114.0 100 60.0
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.1e-23 114.0 72 79.2
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 6.7e-21 104.8 98 57.1
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 8.7e-21 104.4 98 61.2
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 3.3e-20 102.4 105 41.9
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 4.3e-20 102.1 59 78.0
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 5.6e-20 101.7 111 37.8
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 1.6e-19 100.1 80 55.0
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 1.6e-19 100.1 80 55.0
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 2.1e-19 99.8 63 71.4
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 2.8e-19 99.4 63 74.6
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 2.8e-19 99.4 125 44.0
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 3.6e-19 99.0 63 68.3
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 5.3e-18 95.1 100 54.0
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 5.3e-18 95.1 100 54.0
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.2e-17 94.0 89 51.7
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.5e-17 93.6 106 38.7
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 3.4e-17 92.4 165 38.8
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 7.6e-17 91.3 52 76.9
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 7.6e-17 91.3 52 76.9
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 2.4e-15 86.3 51 74.5
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.7e-14 82.8 87 52.9
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 7.9e-14 81.3 52 78.8
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 1.3e-13 80.5 51 78.4
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 1.8e-13 80.1 52 76.9
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 1.9e-12 76.6 118 29.7
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 3.3e-12 75.9 51 70.6
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 1.2e-06 57.4 32 84.4
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 3.5e-06 55.8 103 31.1


User provided reference genes

Program Settings