Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G013246 Manihot esculenta HOM05D000002 ORTHO05D018988 5.7e-61 237.7 142 100.0
HanXRQChr09g0272931 Helianthus annuus HOM05D000002 ORTHO05D000001 3.0e-14 82.4 109 41.3
ECA240G0788 Erigeron canadensis HOM05D001247 ORTHO05D000001 3.4e-13 79.0 115 40.0
SHI48537 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-12 74.3 112 37.5
SHI50559 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-12 74.3 112 37.5
Sabra17G0006900 Salix brachista HOM05D000094 ORTHO05D000001 1.4e-11 73.6 102 38.2
Sabra16G0042600 Salix brachista HOM05D000002 ORTHO05D000001 2.4e-11 72.8 102 38.2
SHI00043 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-11 72.8 102 37.3
SHI03723 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-11 72.8 112 37.5
SHI50889 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-11 72.8 102 37.3
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 3.1e-11 72.4 112 37.5
Sabra04G0073400 Salix brachista HOM05D000002 ORTHO05D000001 3.1e-11 72.4 102 37.3
ECA236G4471 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-11 72.0 104 41.3
SHI52558 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-11 72.0 102 37.3
SHI54230 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-11 72.0 102 37.3
ECA234G1796 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-11 71.6 103 39.8
ECA236G0844 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-11 71.6 100 38.0
Sabra10G0184600 Salix brachista HOM05D001381 ORTHO05D000001 5.4e-11 71.6 102 37.3
Sabra16G0279200 Salix brachista HOM05D000002 ORTHO05D000001 5.4e-11 71.6 102 37.3
SHI07276 Sapria himalayana HOM05D000002 ORTHO05D029283 1.2e-10 70.5 110 36.4
SHI51318 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 102 36.3
SHI51601 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 102 36.3
SHI18827 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.1 94 38.3
SHI51037 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.1 102 36.3
SHI51882 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.1 102 36.3
Sabra05G0106300 Salix brachista HOM05D000002 ORTHO05D000001 2.0e-10 69.7 107 36.4
SHI07169 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.2 102 35.3
SHI50804 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-10 67.8 102 36.3
SHI43948 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-09 67.4 102 35.3
SHI44232 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-09 67.4 102 35.3
ECA240G1692 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.0 98 36.7
SHI32643 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-09 65.5 114 35.1
HanXRQChr03g0090001 Helianthus annuus HOM05D000002 ORTHO05D000001 5.0e-09 65.1 112 35.7
ECA248G0206 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-09 64.7 100 35.0
ECA233G5505 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-09 64.3 95 41.1
ECA246G1848 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 85 42.4
HanXRQChr11g0342811 Helianthus annuus HOM05D000068 ORTHO05D000084 1.1e-08 63.9 111 34.2
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 5.6e-08 61.6 102 39.2
ECA247G1784 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-08 61.6 110 34.5
HanXRQChr04g0118821 Helianthus annuus HOM05D000002 ORTHO05D000001 5.6e-08 61.6 93 33.3
THA.LOC104820084 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.3e-08 61.2 76 46.1
Ca_26249_v3 Cicer arietinum L. HOM05D000002 ORTHO05D018988 9.5e-08 60.8 100 30.0
ECA246G0243 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-08 60.8 115 33.0
Os08g0125300 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D000001 9.5e-08 60.8 99 34.3
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-07 60.5 114 33.3
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-07 60.5 114 33.3
ECA234G0202 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 60.1 81 39.5
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.9 109 32.1
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-07 58.2 103 32.0
HanXRQChr14g0426681 Helianthus annuus HOM05D000002 ORTHO05D000001 8.0e-07 57.8 111 31.5
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 102 35.3
ECA246G4098 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 97 34.0
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-06 56.6 108 30.6
ECA232G4380 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.6 105 32.4
ECA248G1037 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.6 112 31.2
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 106 32.1
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 111 35.1
Ca_04987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-06 55.8 110 30.9
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 97 32.0
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 112 33.9
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 112 33.9
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 112 33.9
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 112 33.9
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.5 96 35.4
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.5 99 32.3
Ca_11778_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 4.0e-06 55.5 113 28.3
CSS0012618 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 55.1 97 36.1
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 55.1 113 32.7
Ca_02351_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.2e-06 55.1 103 34.0
Ca_06967_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.2e-06 55.1 99 29.3
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 55.1 99 35.4
Ca_23665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.8e-06 54.7 103 31.1
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 92 35.9
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 115 33.0
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 54.7 111 33.3
SHI45230 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 54.7 111 29.7
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 109 32.1
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 109 32.1
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 109 32.1
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 54.7 109 32.1
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.9e-06 54.3 115 32.2


User provided reference genes

Program Settings