Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 1.1e-49 199.5 92 100.0
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 1.4e-47 192.6 92 94.6
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.4e-47 192.6 92 95.7
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.5e-46 189.1 92 94.6
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 2.0e-46 188.7 90 94.4
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 2.0e-46 188.7 92 93.5
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 4.4e-46 187.6 92 92.4
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 2.2e-45 185.3 92 91.3
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 2.2e-45 185.3 92 91.3
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.1e-44 183.0 85 96.5
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 3.1e-44 181.4 89 91.0
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 3.1e-44 181.4 89 91.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 4.1e-44 181.0 89 91.0
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 6.9e-44 180.3 87 92.0
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 6.9e-44 180.3 92 88.0
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 6.9e-44 180.3 92 88.0
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 1.2e-43 179.5 92 89.1
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 4.5e-43 177.6 87 88.5
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 1.3e-42 176.0 86 91.9
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 2.2e-42 175.3 92 87.0
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 2.2e-42 175.3 92 87.0
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 3.8e-42 174.5 88 86.4
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 3.8e-42 174.5 87 89.7
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 3.8e-42 174.5 87 88.5
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 3.8e-42 174.5 92 85.9
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 3.8e-42 174.5 85 90.6
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 8.5e-42 173.3 87 88.5
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 8.5e-42 173.3 92 84.8
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 8.5e-42 173.3 90 86.7
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 8.5e-42 173.3 90 86.7
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 8.5e-42 173.3 90 86.7
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.1e-41 172.9 92 83.7
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.4e-41 172.6 92 84.8
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 1.4e-41 172.6 86 90.7
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 1.4e-41 172.6 86 89.5
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.5e-41 171.8 90 85.6
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 3.2e-41 171.4 87 87.4
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.2e-41 171.4 92 83.7
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 3.2e-41 171.4 92 84.8
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 4.2e-41 171.0 86 89.5
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 7.2e-41 170.2 89 84.3
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 7.2e-41 170.2 92 84.8
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 7.2e-41 170.2 85 91.8
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.1e-40 168.7 89 86.5
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 2.7e-40 168.3 85 88.2
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.7e-40 168.3 89 85.4
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 3.6e-40 167.9 92 82.6
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 3.6e-40 167.9 92 81.5
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 4.7e-40 167.5 84 89.3
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 1.0e-39 166.4 92 81.5
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.0e-39 166.4 86 84.9
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.0e-39 166.4 90 82.2
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 1.4e-39 166.0 91 80.2
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 3.0e-39 164.9 90 82.2
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 3.9e-39 164.5 86 84.9
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-39 164.5 86 84.9
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-39 164.5 86 84.9
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-39 164.5 86 84.9
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 5.2e-39 164.1 89 78.7
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 8.8e-39 163.3 84 85.7
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 8.8e-39 163.3 84 85.7
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 8.8e-39 163.3 91 79.1
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 1.5e-38 162.5 85 83.5
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 1.5e-38 162.5 82 89.0
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 1.5e-38 162.5 83 85.5
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 1.5e-38 162.5 84 88.1
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 2.0e-38 162.2 89 82.0
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.6e-38 161.8 86 82.6
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 4.4e-38 161.0 87 80.5
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 7.4e-38 160.2 84 83.3
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 7.4e-38 160.2 84 83.3
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 7.4e-38 160.2 86 82.6
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 7.4e-38 160.2 86 82.6
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 7.4e-38 160.2 83 86.7
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 7.4e-38 160.2 83 86.7
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 1.7e-37 159.1 91 75.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 1.7e-37 159.1 90 76.7
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 2.2e-37 158.7 86 80.2
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 3.7e-37 157.9 87 78.2
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 3.7e-37 157.9 90 75.6
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 3.7e-37 157.9 90 75.6
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 3.7e-37 157.9 83 83.1
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.1e-36 156.4 82 84.1
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.1e-36 156.4 81 84.0
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.4e-36 156.0 86 80.2
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.4e-36 156.0 89 76.4
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.4e-36 156.0 81 86.4
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.4e-36 156.0 88 78.4
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 2.4e-36 155.2 81 82.7
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 3.1e-36 154.8 92 75.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 9.1e-36 153.3 85 78.8
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 9.1e-36 153.3 85 78.8
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 9.1e-36 153.3 85 78.8
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 9.1e-36 153.3 85 78.8
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 9.1e-36 153.3 89 77.5
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.2e-35 152.9 89 75.3
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 2.0e-35 152.1 85 77.6
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 77.6
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 77.6
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 77.6
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.6e-35 151.8 85 77.6
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 5.0e-34 147.5 76 86.8
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 2.1e-32 142.1 90 71.1
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 2.7e-32 141.7 90 72.2
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 3.6e-32 141.4 83 79.5
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 4.7e-32 141.0 90 68.9
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 1.4e-31 139.4 87 71.3
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 1.8e-31 139.0 84 73.8
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.0e-31 138.3 85 75.3
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 5.2e-31 137.5 85 71.8
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.6e-30 135.2 86 69.8
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 1.3e-29 132.9 84 71.4
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.2e-29 132.1 87 69.0
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 3.7e-29 131.3 72 73.6
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 3.7e-29 131.3 84 71.4
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 3.5e-27 124.8 87 63.2
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.5e-22 109.4 70 71.4
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.5e-22 109.4 70 71.4
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 3.7e-21 104.8 84 51.2
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 2.4e-20 102.1 82 51.2
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.1e-20 101.7 57 73.7
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 1.0e-18 96.7 78 53.8
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 1.4e-15 86.3 42 83.3
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 6.8e-15 84.0 78 44.9
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 1.5e-14 82.8 85 42.4
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 7.8e-11 70.5 41 80.5
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 1.7e-10 69.3 86 47.7
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 1.0e-07 60.1 56 51.8
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 4.0e-07 58.2 36 75.0
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 6.8e-07 57.4 36 72.2


User provided reference genes

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