Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.8e-150 535.8 259 100.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 3.6e-106 388.7 258 74.8
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.5e-104 383.3 261 71.6
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.7e-103 378.6 253 75.1
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 4.9e-103 378.3 256 73.0
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.4e-102 376.7 254 72.0
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 4.1e-102 375.2 256 70.7
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 3.5e-101 372.1 259 71.4
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 3.9e-100 368.6 252 71.8
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.1e-99 367.1 257 72.0
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.5e-99 366.7 224 77.7
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 4.3e-99 365.2 254 71.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.3e-99 365.2 236 73.3
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.3e-99 365.2 236 73.3
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.3e-99 364.4 214 79.9
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 7.3e-99 364.4 224 76.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 7.3e-99 364.4 224 76.8
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.6e-98 363.2 224 76.8
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.6e-98 363.2 224 76.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.6e-98 363.2 227 75.8
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 8.1e-98 360.9 252 69.8
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.1e-97 360.5 221 77.4
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.1e-97 360.5 255 69.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.1e-97 360.5 252 70.2
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.4e-97 360.1 223 77.1
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.8e-97 359.8 224 76.3
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 5.2e-97 358.2 228 74.6
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 6.8e-97 357.8 238 72.3
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 6.8e-97 357.8 251 68.9
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.0e-96 356.3 203 81.8
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.6e-96 355.9 199 82.4
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 3.4e-96 355.5 227 73.1
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 3.4e-96 355.5 252 69.0
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 7.6e-96 354.4 209 78.5
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 7.6e-96 354.4 252 69.0
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 2.9e-95 352.4 210 77.6
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 2.9e-95 352.4 251 69.3
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 8.4e-95 350.9 213 76.5
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.4e-94 350.1 199 80.4
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.4e-94 349.4 199 79.9
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.4e-94 349.4 254 68.9
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.2e-94 349.0 235 71.5
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.2e-93 347.1 251 68.5
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.7e-93 345.9 199 78.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.7e-93 345.9 255 65.5
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 2.7e-93 345.9 250 66.4
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 6.0e-93 344.7 234 72.2
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 7.8e-93 344.4 214 74.3
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.0e-92 344.0 214 74.3
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 1.0e-92 344.0 199 77.4
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.0e-92 344.0 241 66.8
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.0e-92 344.0 211 78.2
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.3e-92 343.6 250 68.4
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.3e-92 343.6 229 73.4
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.7e-92 343.2 214 74.8
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 3.9e-92 342.0 252 67.9
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 5.1e-92 341.7 218 73.4
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 8.7e-92 340.9 252 67.5
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 8.7e-92 340.9 232 73.7
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.5e-91 340.1 207 78.7
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.9e-91 339.7 212 75.0
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 4.3e-91 338.6 239 69.5
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 4.3e-91 338.6 232 70.3
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 7.3e-91 337.8 210 74.3
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 9.6e-91 337.4 214 73.4
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.6e-90 336.7 238 68.1
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.8e-90 335.9 202 77.7
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 2.8e-90 335.9 214 72.4
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 3.6e-90 335.5 203 77.3
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 4.7e-90 335.1 210 73.8
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 1.1e-89 334.0 214 73.4
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.1e-89 334.0 241 64.7
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.4e-89 333.6 221 68.8
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 5.3e-89 331.6 203 76.4
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.2e-88 330.5 209 73.7
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.2e-88 330.5 209 73.7
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 4.4e-88 328.6 230 68.3
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 3.8e-87 325.5 185 81.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 8.4e-87 324.3 211 69.7
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.9e-86 323.2 212 71.2
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 4.6e-85 318.5 227 64.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 6.0e-85 318.2 225 62.7
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 9.6e-83 310.8 200 71.0
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 4.8e-82 308.5 274 58.0
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.8e-80 301.6 218 64.2
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 6.4e-79 298.1 227 66.5
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 5.4e-78 295.0 226 59.7
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.7e-77 292.7 203 66.0
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.1e-76 288.5 199 68.3
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 4.3e-75 285.4 163 81.0
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.6e-74 283.5 162 80.9
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 2.8e-74 282.7 159 81.1
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.8e-73 280.0 159 81.8
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 4.5e-72 275.4 201 63.7
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 7.6e-72 274.6 159 77.4
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 3.8e-71 272.3 197 61.9
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 8.2e-66 254.6 156 75.0
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.5e-64 250.4 228 57.0
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.8e-52 210.3 215 51.2
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 2.0e-51 206.8 114 79.8
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.9e-49 198.4 109 78.9
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 7.2e-46 188.3 127 73.2
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.3e-42 177.6 105 79.0
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.2e-32 144.4 150 54.7
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 8.5e-31 138.3 202 38.1
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.4e-20 104.4 140 42.1
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 4.1e-17 92.8 57 73.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 2.3e-15 87.0 54 68.5
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.3e-12 77.0 43 74.4
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.7e-10 70.9 43 69.8


User provided reference genes

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