Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 9.7e-275 949.5 473 100.0
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 4.4e-227 791.2 470 81.5
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 9.8e-227 790.0 466 81.3
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 7.1e-225 783.9 464 80.4
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 9.2e-225 783.5 475 80.8
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.2e-224 783.1 461 82.4
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 3.5e-224 781.6 464 80.6
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.9e-222 775.8 465 80.9
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.5e-222 775.4 473 79.1
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 4.3e-222 774.6 471 80.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 5.6e-222 774.2 471 79.4
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 7.3e-222 773.9 461 81.6
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 9.5e-222 773.5 466 80.7
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 4.7e-221 771.2 471 78.6
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 6.2e-221 770.8 467 79.0
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 5.2e-220 767.7 472 79.7
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.2e-219 766.5 466 79.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.5e-219 766.1 469 78.9
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 7.6e-219 763.8 469 77.6
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.3e-218 763.1 471 76.6
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.7e-218 762.7 471 77.1
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 3.8e-218 761.5 466 78.3
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.1e-217 760.0 491 75.8
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 5.4e-217 757.7 470 77.4
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.2e-216 756.5 471 76.4
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 6.0e-216 754.2 509 73.1
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 1.0e-215 753.4 469 75.5
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.7e-215 752.7 462 77.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 2.3e-215 752.3 473 75.1
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 5.1e-215 751.1 473 75.9
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 5.6e-214 747.7 474 74.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 5.6e-214 747.7 473 76.3
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.6e-213 746.1 500 75.0
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 2.1e-213 745.7 474 75.1
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.4e-212 742.3 468 76.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 8.9e-212 740.3 463 75.8
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 9.9e-211 736.9 477 73.6
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.2e-210 735.7 503 71.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 4.9e-210 734.6 469 75.9
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 6.4e-210 734.2 496 72.4
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.4e-209 733.0 474 73.6
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.2e-209 731.9 499 71.9
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.8e-208 727.2 468 74.1
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 7.8e-208 727.2 474 73.2
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.9e-207 724.9 467 74.3
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 4.3e-206 721.5 467 75.4
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 9.0e-204 713.8 469 73.6
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 4.5e-203 711.4 503 70.4
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 7.6e-203 710.7 556 66.0
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 9.9e-203 710.3 463 72.6
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 9.6e-198 693.7 461 71.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 3.7e-197 691.8 466 72.1
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 3.1e-196 688.7 546 63.7
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.4e-193 679.9 470 69.8
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 2.1e-192 676.0 504 64.9
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.0e-191 672.2 469 71.9
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.5e-187 659.8 402 77.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.7e-186 656.4 393 80.2
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.4e-185 653.3 382 81.2
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 2.5e-185 652.5 460 69.8
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.6e-184 649.8 472 67.4
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 6.7e-183 644.4 473 67.4
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.5e-182 642.5 410 74.1
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.5e-182 642.5 410 74.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 7.4e-182 641.0 462 64.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 2.2e-181 639.4 462 64.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.9e-178 629.0 463 65.0
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 6.5e-178 627.9 471 63.1
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 3.2e-177 625.5 409 71.4
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.5e-174 616.7 422 69.9
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.6e-168 595.5 387 73.4
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 6.1e-168 594.7 473 64.3
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.4e-167 593.6 466 62.2
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 2.0e-166 589.7 492 62.4
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 5.7e-166 588.2 365 77.8
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 6.9e-164 581.3 474 62.2
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 2.2e-162 576.2 326 85.3
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 7.5e-150 534.6 368 71.2
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 3.7e-149 532.3 333 76.9
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.8e-146 522.3 368 72.3
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 2.4e-116 423.3 280 72.5
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 9.9e-110 401.4 235 84.7
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.1e-73 281.6 167 82.0
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.3e-66 257.3 452 32.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 4.2e-60 236.5 146 76.0
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.3e-56 224.9 236 55.1
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.7e-51 207.2 159 69.8
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.6e-43 180.3 119 69.7
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.1e-28 132.1 426 26.8
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 3.4e-25 120.6 394 27.2
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.8e-23 114.8 77 70.1
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 2.3e-21 107.8 426 25.1
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 2.6e-17 94.4 342 26.0
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.6e-17 94.4 57 80.7
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 5.9e-14 83.2 466 22.7
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 6.1e-11 73.2 52 59.6
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 4.0e-10 70.5 427 24.8
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 8.9e-10 69.3 399 25.1
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 9.2e-07 59.3 385 20.8


User provided reference genes

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