Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 7.1e-44 180.3 94 100.0
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 3.3e-41 171.4 94 93.6
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.8e-39 165.6 94 90.4
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.5e-38 162.5 94 89.4
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 87.2
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 7.6e-38 160.2 94 86.2
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 7.6e-38 160.2 94 86.2
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 1.3e-37 159.5 94 84.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 85.1
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 85.1
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 2.2e-37 158.7 94 85.1
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 3.8e-37 157.9 94 84.0
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 3.8e-37 157.9 94 83.0
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 85.1
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 8.4e-37 156.8 95 87.4
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 85.1
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 84.0
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 85.1
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 85.1
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 85.1
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 1.9e-36 155.6 94 83.0
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 1.9e-36 155.6 94 83.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 2.4e-36 155.2 95 85.3
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 85.1
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 80.9
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 83.0
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 4.2e-36 154.5 94 85.1
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 4.2e-36 154.5 91 84.6
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 84.0
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 5.4e-36 154.1 88 87.5
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 84.0
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 83.0
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.2e-35 152.9 95 85.3
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 83.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 81.9
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 81.9
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-35 152.5 92 83.7
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-35 152.5 92 83.7
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 79.8
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 79.8
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 81.9
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 4.6e-35 151.0 86 88.4
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.6e-35 151.0 89 84.3
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 7.9e-35 150.2 92 81.5
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 81.9
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 7.9e-35 150.2 93 80.6
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 1.0e-34 149.8 94 84.0
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 77.7
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 78.7
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 5.1e-34 147.5 94 79.8
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 5.1e-34 147.5 89 80.9
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 6.7e-34 147.1 92 83.7
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 6.7e-34 147.1 86 83.7
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 78.7
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.9e-33 145.6 94 76.6
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.3e-33 144.8 90 81.1
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 3.3e-33 144.8 94 75.5
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 3.3e-33 144.8 81 87.7
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.4e-33 143.7 94 78.7
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 9.6e-33 143.3 81 87.7
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 9.6e-33 143.3 90 80.0
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 9.6e-33 143.3 91 78.0
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 9.6e-33 143.3 93 78.5
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.3e-32 142.9 94 74.5
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.6e-32 142.5 91 78.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.8e-32 141.7 91 78.0
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 3.7e-32 141.4 91 76.9
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 3.7e-32 141.4 94 76.6
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 4.8e-32 141.0 93 78.5
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 8.1e-32 140.2 90 77.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 8.1e-32 140.2 90 77.8
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.1e-31 139.8 81 84.0
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 1.4e-31 139.4 90 76.7
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 94 75.5
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 2.4e-31 138.7 91 76.9
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.6e-30 135.2 83 79.5
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.6e-30 135.2 90 75.6
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.4e-30 134.8 79 84.8
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 3.4e-30 134.8 100 71.0
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 3.4e-30 134.8 93 71.0
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 9.9e-30 133.3 79 82.3
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 2.2e-29 132.1 92 73.9
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 2.9e-29 131.7 159 50.9
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 2.9e-29 131.7 94 70.2
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 3.8e-29 131.3 92 72.8
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 3.8e-29 131.3 84 77.4
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 3.8e-29 131.3 92 72.8
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 3.8e-29 131.3 92 72.8
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.1e-28 129.8 92 71.7
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 2.5e-28 128.6 93 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 5.5e-28 127.5 91 69.2
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 5.5e-28 127.5 81 76.5
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 7.1e-28 127.1 75 86.7
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 1.6e-27 125.9 74 86.5
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 4.6e-27 124.4 98 66.3
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 4.6e-27 124.4 73 86.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 6.0e-27 124.0 84 76.2
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.3e-26 122.9 76 84.2
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 2.3e-26 122.1 94 64.9
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 8.7e-26 120.2 77 80.5
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 2.5e-25 118.6 73 80.8
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 3.3e-25 118.2 94 68.1
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 80.8
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 83.6
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 2.1e-24 115.5 87 65.5
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 8.2e-24 113.6 73 75.3
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.4e-23 112.8 76 77.6
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 5.3e-23 110.9 74 78.4
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 6.9e-23 110.5 73 76.7
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.6e-22 108.6 71 74.6
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 2.9e-21 105.1 80 66.2
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 2.9e-21 105.1 68 73.5
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.8e-18 95.9 79 59.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 3.9e-18 94.7 92 56.5
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 9.7e-17 90.1 63 69.8
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.6e-16 89.4 107 52.3
Zm00001eb333130 Zea mays HOM05D002854 ORTHO05D003051 3.4e-06 55.1 90 42.2
CiPaw.10G167200 Carya illinoinensis HOM05D002854 ORTHO05D003051 7.7e-06 53.9 83 39.8


User provided reference genes

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