Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.1e-105 384.4 195 100.0
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 2.0e-72 276.2 196 72.4
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 7.5e-72 274.2 197 72.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.8e-70 269.6 195 68.7
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 2.4e-70 269.2 202 68.3
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.1e-70 268.9 198 72.2
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 3.1e-70 268.9 196 71.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 7.0e-70 267.7 194 70.6
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 3.5e-69 265.4 199 72.4
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.5e-69 265.4 208 67.8
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 4.5e-69 265.0 197 71.1
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.3e-68 263.5 201 70.6
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 5.0e-68 261.5 193 68.4
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 6.6e-68 261.2 202 67.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 6.6e-68 261.2 197 68.0
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.5e-67 260.0 197 67.0
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.5e-67 260.0 206 68.4
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.9e-67 259.6 196 69.4
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.5e-67 259.2 192 67.7
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 7.3e-67 257.7 204 66.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 1.6e-66 256.5 196 67.9
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 2.8e-66 255.8 196 67.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 6.1e-66 254.6 195 67.2
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.8e-65 253.1 199 66.8
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.0e-65 252.3 197 68.0
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.0e-65 252.3 197 68.0
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.2e-65 251.5 197 68.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.4e-64 248.4 192 68.8
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 9.8e-64 247.3 208 63.0
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.3e-63 246.9 199 64.3
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.3e-63 246.9 199 64.3
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.4e-62 243.4 191 68.1
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.2e-62 242.3 201 65.2
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 7.0e-62 241.1 199 66.8
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 1.2e-61 240.4 208 62.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.5e-61 238.8 201 64.7
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 4.6e-61 238.4 203 63.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 4.6e-61 238.4 199 66.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 5.9e-61 238.0 200 65.5
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 7.8e-61 237.7 202 65.8
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.3e-60 236.1 198 63.6
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 3.0e-60 235.7 201 63.7
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 5.0e-60 235.0 187 65.8
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 5.0e-60 235.0 200 66.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 8.6e-60 234.2 196 64.8
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 8.6e-60 234.2 201 63.7
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 8.6e-60 234.2 203 57.6
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 1.5e-59 233.4 202 61.4
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.9e-59 233.0 199 61.8
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 5.6e-59 231.5 206 62.1
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 7.3e-59 231.1 194 66.5
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.6e-58 228.8 197 60.4
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 4.7e-58 228.4 197 62.4
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 8.0e-58 227.6 196 61.7
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.1e-57 227.3 198 64.6
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 3.1e-57 225.7 205 59.5
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 3.1e-57 225.7 198 65.2
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 5.2e-57 224.9 201 59.2
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 5.2e-57 224.9 198 58.6
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 5.2e-57 224.9 193 62.2
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 6.8e-57 224.6 208 58.7
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 2.0e-56 223.0 201 61.7
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 2.6e-56 222.6 204 61.8
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 5.8e-56 221.5 186 64.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 7.5e-56 221.1 186 61.3
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 7.5e-56 221.1 197 61.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 7.5e-56 221.1 190 63.7
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.3e-55 220.3 204 61.3
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.9e-54 216.5 193 61.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 7.0e-54 214.5 141 75.2
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.0e-53 213.0 198 56.1
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.0e-52 210.7 207 58.5
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 5.0e-52 208.4 188 56.4
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 5.0e-52 208.4 193 59.1
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 6.6e-52 208.0 160 64.4
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 8.6e-52 207.6 207 54.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.9e-51 206.5 207 53.6
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.9e-51 206.5 207 53.6
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.9e-51 206.5 207 53.6
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.5e-51 206.1 164 63.4
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 3.3e-51 205.7 200 57.0
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 5.6e-51 204.9 207 53.6
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 5.6e-51 204.9 182 59.9
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 9.5e-51 204.1 207 54.6
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 9.5e-51 204.1 188 56.4
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 1.2e-50 203.8 206 53.9
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.2e-50 203.8 165 61.8
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 2.1e-50 203.0 212 57.1
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.8e-49 199.9 165 61.8
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.6e-48 196.1 195 52.8
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.6e-48 196.1 195 52.8
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 2.2e-47 193.0 142 66.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 4.9e-47 191.8 205 53.2
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.4e-46 189.5 168 58.9
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 9.2e-46 187.6 213 52.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.2e-45 187.2 202 50.0
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.7e-45 186.0 206 51.9
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.7e-45 186.0 206 49.5
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.0e-44 182.6 212 47.6
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.2e-40 170.6 150 54.7
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 8.6e-36 154.5 149 50.3
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.1e-35 154.1 154 50.6
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.3e-27 125.9 92 62.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 5.6e-27 125.2 169 46.2
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 4.8e-26 122.1 118 51.7
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 3.3e-19 99.4 114 57.0
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 5.6e-19 98.6 139 38.1
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.7e-18 95.9 115 47.8
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 5.3e-17 92.0 137 31.4
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 6.9e-17 91.7 139 32.4
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.3e-15 87.4 135 36.3
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 3.2e-14 82.8 106 45.3
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 5.5e-14 82.0 139 34.5
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.1e-13 80.1 137 35.8
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 4.6e-13 79.0 160 32.5
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 8.2e-10 68.2 75 52.0


User provided reference genes

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