Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G121700 Manihot esculenta HOM05D004638 ORTHO05D005443 2.9e-93 345.5 211 100.0
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 9.3e-44 181.0 194 68.0
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 5.3e-39 165.2 193 60.1
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 1.0e-37 161.0 194 60.3
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 1.0e-37 161.0 222 49.5
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 2.5e-36 156.4 197 52.8
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 2.5e-36 156.4 194 59.8
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 5.5e-36 155.2 200 58.5
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 7.2e-36 154.8 194 61.3
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 1.1e-33 147.5 198 61.6
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 3.3e-33 146.0 194 50.0
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 6.3e-32 141.7 194 53.6
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 6.3e-32 141.7 194 53.6
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 8.2e-32 141.4 197 52.3
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 8.2e-32 141.4 194 55.7
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 1.1e-31 141.0 226 51.8
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 1.1e-31 141.0 226 51.8
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 2.4e-31 139.8 225 47.1
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 2.4e-31 139.8 199 48.7
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 3.4e-30 136.0 198 53.0
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 4.5e-30 135.6 225 44.9
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 5.9e-30 135.2 195 50.3
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 1.3e-29 134.0 197 46.7
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 2.2e-29 133.3 208 52.4
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 2.9e-29 132.9 199 52.8
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 2.9e-29 132.9 199 52.8
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 6.5e-29 131.7 202 52.0
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 1.6e-27 127.1 196 51.0
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 2.1e-27 126.7 219 42.0
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 6.1e-27 125.2 203 45.8
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 1.0e-26 124.4 198 51.0
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 1.4e-26 124.0 197 44.2
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 3.9e-26 122.5 196 44.4
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 5.1e-26 122.1 197 49.2
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 6.7e-26 121.7 197 50.3
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 1.1e-25 120.9 223 46.6
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 1.1e-25 120.9 197 45.7
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 2.0e-25 120.2 197 47.2
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 5.7e-25 118.6 197 44.7
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 5.7e-25 118.6 199 45.2
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 9.7e-25 117.9 200 51.0
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 9.7e-25 117.9 200 51.0
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 9.7e-25 117.9 228 46.1
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 1.3e-24 117.5 197 49.7
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 2.2e-24 116.7 195 55.4
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.3e-24 115.2 200 50.0
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.8e-23 113.6 200 44.5
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.8e-23 113.6 200 49.5
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 1.8e-23 113.6 194 47.4
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 2.4e-23 113.2 196 49.0
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 4.1e-23 112.5 162 53.1
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 4.1e-23 112.5 201 43.8
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 5.3e-23 112.1 200 44.5
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 5.3e-23 112.1 186 50.5
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 7.0e-23 111.7 203 43.3
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 2.0e-22 110.2 202 44.1
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 2.6e-22 109.8 191 46.1
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 1.7e-21 107.1 195 42.1
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 2.2e-21 106.7 197 47.2
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 5.0e-21 105.5 200 40.0
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 6.5e-21 105.1 199 41.7
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 8.5e-21 104.8 218 41.3
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 1.1e-20 104.4 195 46.2
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 1.1e-20 104.4 217 40.1
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 1.9e-20 103.6 195 41.5
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 1.9e-20 103.6 190 44.2
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 7.2e-20 101.7 193 49.2
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 1.2e-19 100.9 195 40.0
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 1.2e-19 100.9 189 40.7
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 1.6e-19 100.5 189 38.1
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 2.7e-19 99.8 205 39.5
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 2.7e-19 99.8 190 40.5
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 2.7e-19 99.8 208 39.4
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 3.6e-19 99.4 187 38.5
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 4.7e-19 99.0 200 40.5
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 6.1e-19 98.6 197 44.7
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 1.0e-18 97.8 196 39.8
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 1.0e-18 97.8 196 39.8
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 1.8e-18 97.1 194 38.7
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 1.8e-18 97.1 194 38.7
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 2.3e-18 96.7 197 43.1
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 8.8e-18 94.7 165 47.3
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 1.1e-17 94.4 204 42.6
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 4.4e-17 92.4 183 45.4
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 7.5e-17 91.7 217 33.6
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 1.3e-16 90.9 200 44.0
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 1.7e-16 90.5 203 42.9
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 4.8e-16 89.0 239 34.3
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 4.8e-16 89.0 197 38.1
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 6.3e-16 88.6 208 39.4
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.2e-13 80.1 191 39.8
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 1.9e-12 77.0 205 39.0
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 5.5e-12 75.5 195 40.0
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 9.4e-12 74.7 231 35.9
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 2.7e-11 73.2 195 47.2
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 4.7e-11 72.4 211 34.1
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 8.0e-11 71.6 203 37.9
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 4.0e-10 69.3 142 40.8
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 2.6e-09 66.6 185 34.1
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 2.2e-08 63.5 189 37.0
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 2.8e-08 63.2 194 37.1
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 4.8e-08 62.4 198 33.8
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 1.4e-07 60.8 209 29.2
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 2.4e-07 60.1 193 36.3
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 4.1e-07 59.3 188 31.9
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 4.1e-07 59.3 188 31.4
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 5.4e-07 58.9 220 26.8
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 9.1e-07 58.2 203 36.5
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 9.1e-07 58.2 242 27.3
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 1.2e-06 57.8 232 35.8
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 1.6e-06 57.4 231 34.6
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 2.0e-06 57.0 185 28.6
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 2.7e-06 56.6 67 52.2
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 4.5e-06 55.8 179 31.8
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 5.9e-06 55.5 201 29.9
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 7.7e-06 55.1 199 31.2


User provided reference genes

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